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https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
Nicola Soranzo
c35d8f2a06
Also: - Rename `FooBarTestCase` test classes as `TestFooBar`. These were collected by pytest only because they were `unittest.TestCase` derived, but normally pytest collects only test classes whose name starts with `Test`, see https://docs.pytest.org/en/7.1.x/reference/reference.html#confval-python_classes
37 lines
1.3 KiB
Python
37 lines
1.3 KiB
Python
import os
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from galaxy_test.base.populators import DatasetPopulator
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from galaxy_test.driver import integration_util
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SCRIPT_DIRECTORY = os.path.abspath(os.path.dirname(__file__))
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MOCK_BIOTOOLS_CONTENT = os.path.join(SCRIPT_DIRECTORY, "mock_biotools_content")
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class TestDynamicEdamLoadingIntegration(integration_util.IntegrationTestCase):
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"""Test mapping over tools with extended metadata enabled."""
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framework_tool_and_types = True
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@classmethod
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def handle_galaxy_config_kwds(cls, config):
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super().handle_galaxy_config_kwds(config)
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config["biotools_content_directory"] = MOCK_BIOTOOLS_CONTENT
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config["biotools_use_api"] = False
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def setUp(self):
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super().setUp()
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self.dataset_populator = DatasetPopulator(self.galaxy_interactor)
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def test_edam_properties(self):
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result = self._get("tools/bibtex")
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result.raise_for_status()
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result_json = result.json()
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assert "edam_operations" in result_json
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assert "edam_topics" in result_json
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edam_operations = result_json["edam_operations"]
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edam_topics = result_json["edam_topics"]
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assert len(edam_operations) == 4
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assert "operation_3198" in edam_operations
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assert len(edam_topics) == 1
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assert "topic_0102" in edam_topics
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