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23 lines
788 B
XML
23 lines
788 B
XML
<tool id="mapper" name="Mapper" version="0.1.0">
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<edam_topics>
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<edam_topic>topic_0102</edam_topic><!-- CompBio -> SeqAnalysis -> Mapping -->
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</edam_topics>
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<edam_operations>
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<edam_operation>operation_3198</edam_operation> <!-- Analysis -> SeqAnalysis -> Nucleic acid sequence analysis -> Sequence read processing -> Read Mapping -->
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</edam_operations>
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<command><![CDATA[
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cp '$__tool_directory__/1.bam' '$out_file1'
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]]></command>
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<inputs>
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<param name="input1" type="data" format="fastq" label="Fastq Input"/>
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<param name="reference" type="data" format="fasta" label="Fasta Input"/>
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</inputs>
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<outputs>
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<data name="out_file1" format="bam" />
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</outputs>
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<tests>
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</tests>
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<help>
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</help>
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</tool>
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