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27 lines
986 B
XML
27 lines
986 B
XML
<tool id="count_gff_features" name="Count GFF Features" version="0.1">
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<description></description>
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<command interpreter="python">
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count_gff_features.py $input > $output
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</command>
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<inputs>
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<param format="gff" name="input" type="data" label="GFF Dataset to Filter"/>
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</inputs>
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<outputs>
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<data format="txt" name="output"/>
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</outputs>
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<tests>
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<test>
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<param name="input" value="gff2bed_in2.gff"/>
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<output name="output" file="count_gff_features_out1.txt"/>
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</test>
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<test>
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<param name="input" value="gff_filter_by_feature_count_out1.gff"/>
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<output name="output" file="count_gff_features_out2.txt"/>
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</test>
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</tests>
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<help>
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Counts the number of features in a GFF dataset. GFF features are often spread across multiple lines; this tool counts the number of
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features in dataset rather than the number of lines.
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</help>
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</tool>
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