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24 lines
741 B
XML
24 lines
741 B
XML
<tool id="discover_metadata_files" name="discover metadata files" version="1.0.0" profile="16.04">
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<command>
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<![CDATA[
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mkdir outputs && cp '$input_bam' outputs/output.bam
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]]>
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</command>
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<inputs>
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<param name="input_bam" type="data" format="bam" label="BAM File" />
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</inputs>
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<outputs>
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<data format="txt" name="bam_output" label="discovered bam" hidden="true">
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<discover_datasets pattern="__name__" directory="outputs" ext="bam" visible="true" />
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</data>
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</outputs>
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<tests>
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<test>
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<param name="input_bam" value="3.bam" ftype="bam" />
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<output name="bam_output">
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<discovered_dataset designation="output.bam" file="3.bam" ftype="bam" />
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</output>
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</test>
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</tests>
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</tool>
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