Files
galaxy/scripts/external_chown_script.py
T
Matthias Bernt aa200fe463 implemented the changes requested by @mvdbeek:
- check for external_chown_script == None
- switched from string split to shlex.split
- changed import order for pwd
- stderr + exit -> just exit
2017-06-13 15:03:31 +02:00

50 lines
1.5 KiB
Python
Executable File

#!/usr/bin/env python
import os
import sys
# you may configure the paths below which modifications are allowed.
# should contain the full paths to job_working_directory and new_file_path.
# if set to None every file can be modified by the script.
# this can increase security in particular if write access to this
# script is removed by the admin.
#
# ALLOWED_PATHS = [ "job_working_directory", "new_file_path" ]
ALLOWED_PATHS = None
def validate_paramaters():
if len(sys.argv) < 4:
sys.stderr.write("usage: %s path user_name gid\n" % sys.argv[0])
exit(1)
path = os.path.abspath( sys.argv[1] )
if ALLOWED_PATHS is None:
allowed = True
else:
allowed = False
for p in ALLOWED_PATHS:
if path.startswith( p ):
allowed = True
break
if not allowed:
sys.stderr.write( "owner and group modifications in %s are not allowed\n" % path )
sys.exit( 1 )
galaxy_user_name = sys.argv[2]
gid = sys.argv[3]
return path, galaxy_user_name, gid
def main():
path, galaxy_user_name, gid = validate_paramaters()
for cmd in [[ 'chown', '-Rh', galaxy_user_name, path ], [ 'chgrp', '-Rh', gid, path ]]:
p = os.subprocess.Popen(cmd, shell=False, stdout=os.subprocess.PIPE, stderr=os.subprocess.PIPE)
(stdoutdata, stderrdata) = p.communicate()
exitcode = p.returncode
if exitcode != 0:
sys.exit("external_chown_script: could not chown\ncmd was %s\n" % " ".join(cmd))
if __name__ == "__main__":
main()