Files
galaxy/scripts/cleanup_datasets/rename_purged_datasets.py
T

32 lines
1.0 KiB
Python

#!/usr/bin/env python
"""
Renames a dataset file by appending _purged to the file name so that it can later be removed from disk.
Usage: python rename_purged_datasets.py purge.log
"""
import sys, os
assert sys.version_info[:2] >= ( 2, 4 )
def main():
infile = sys.argv[1]
outfile = infile + ".renamed.log"
out = open( outfile, 'w' )
print >> out, "# The following renamed datasets can be removed from disk"
i = 0
renamed_files = 0
for i, line in enumerate( open( infile ) ):
line = line.rstrip( '\r\n' )
if line and line.startswith( '/var/opt/galaxy' ):
try:
purged_filename = line + "_purged"
os.rename( line, purged_filename )
print >> out, purged_filename
renamed_files += 1
except Exception, exc:
print >> out, "# Error, exception " + str( exc ) + " caught attempting to rename " + purged_filename
print >> out, "# Renamed " + str( renamed_files ) + " files"
if __name__ == "__main__":
main()