mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-16 07:19:13 +08:00
John Chilton
f37075c1a5
I previously failed to include a bunch of validation checks I assumed had been covered so fixed that first and got a bunch of new issues detected. Also added a parameter specification test case for https://github.com/galaxyproject/galaxy/issues/19908 and fixed that.
2026 lines
58 KiB
YAML
2026 lines
58 KiB
YAML
# Tools to create.
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# Notes on conditional boolean values...
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# - if you set truevalue/falsevalue - it doesn't look like the when can remain
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# true/false - so go through and simplify that. means don't need to create test
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# cases that test that. Linting also at very least warns on this.
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# - gx_conditional_boolean_empty_default
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# - gx_conditional_boolean_empty_else
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# - gx_conditional_select_*
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# - gx_repeat_select_required
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# - gx_repeat_repeat_select_required
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# - gx_repeat_conditional_boolean_optional
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# Things to verify:
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# - non optional, multi-selects require a selection (see TODO below...)
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# - https://github.com/galaxyproject/galaxy/issues/18541
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gx_int:
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request_valid:
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- parameter: 5
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- parameter: 6
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# galaxy parameters created with a value - so doesn't need to appear in request even though non-optional
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- {}
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request_invalid:
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- parameter: null
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- parameter: "null"
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- parameter: "None"
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- parameter: { 5 }
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- parameter: {__class__: 'ConnectedValue'}
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job_internal_valid:
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- parameter: 5
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job_internal_invalid:
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- parameter: null
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- {}
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landing_request_valid:
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- {}
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- parameter: 5
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landing_request_invalid:
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- parameter: "moo"
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- parameter: "5"
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landing_request_internal_valid:
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- {}
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- parameter: 5
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landing_request_internal_invalid:
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- parameter: "moo"
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- parameter: "5"
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test_case_xml_valid:
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- parameter: 5
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- {}
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test_case_xml_invalid:
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- parameter: null
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- parameter: "5"
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workflow_step_valid:
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- parameter: 5
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- {}
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workflow_step_invalid:
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- parameterx: 5
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- parameter: 'foobar'
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workflow_step_linked_valid:
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- parameter: 5
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: null
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- parameter: 'foobar'
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- parameter: {__class__: 'ConnectedValue2'}
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gx_boolean:
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request_valid:
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- parameter: True
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- parameter: False
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- {}
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request_invalid:
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- parameter: {}
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- parameter: "true"
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# This is borderline... should we allow truevalue/falsevalue in the API.
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# Marius and John were on fence here.
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- parameter: "mytrue"
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- parameter: null
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- parameter: {__class__: 'ConnectedValue'}
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job_internal_valid:
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- parameter: true
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- parameter: false
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job_internal_invalid:
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- {}
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landing_request_valid:
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- {}
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- parameter: true
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- parameter: false
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landing_request_invalid:
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- parameter: "true"
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- parameter: "5"
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landing_request_internal_valid:
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- {}
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- parameter: true
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- parameter: false
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landing_request_internal_invalid:
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- parameter: "moo"
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- parameter: "true"
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- parameter: "5"
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workflow_step_valid:
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- parameter: True
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- {}
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workflow_step_invalid:
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- parameter: "true"
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- parameter: mytrue
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- parameter: null
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workflow_step_linked_valid:
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- parameter: True
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- {}
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: "true"
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- parameter: {__class__: 'ConnectedValue3'}
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gx_int_optional:
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request_valid:
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- parameter: 5
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- parameter: null
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- {}
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request_invalid:
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- parameter: "5"
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- parameter: "None"
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- parameter: "null"
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- parameter: [5]
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- parameter: {__class__: 'ConnectedValue'}
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job_internal_valid:
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- parameter: 5
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- parameter: null
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job_internal_invalid:
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- {}
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test_case_xml_valid:
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- parameter: null
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landing_request_valid:
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- {}
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- parameter: 5
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- parameter: null
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landing_request_invalid:
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- parameter: "moo"
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- parameter: "5"
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landing_request_internal_valid:
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- {}
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- parameter: 5
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- parameter: null
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landing_request_internal_invalid:
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- parameter: "moo"
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- parameter: "5"
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workflow_step_valid:
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- parameter: 5
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- parameter: null
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- {}
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workflow_step_invalid:
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- parameter: "5"
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- parameter: "None"
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- parameter: "null"
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- parameter: [5]
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workflow_step_linked_valid:
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- parameter: 5
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- parameter: null
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- {}
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- parameter: {__class__: 'ConnectedValue'}
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gx_int_required: &gx_int_required
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request_valid:
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- parameter: 5
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- parameter: 6
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request_invalid:
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- {}
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- parameter: null
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- parameter: "null"
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- parameter: "None"
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- parameter: { 5 }
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- parameter: {__class__: 'ConnectedValue'}
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job_internal_valid:
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- parameter: 5
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job_internal_invalid:
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- {}
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# and actual request will require a value but the landing only needs to specify parameters
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# of interest - forcing users to make the rest of the selections.
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landing_request_valid:
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- {}
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- parameter: 5
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landing_request_invalid:
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- parameter: "moo"
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- parameter: "5"
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landing_request_internal_valid:
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- {}
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- parameter: 5
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landing_request_internal_invalid:
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- parameter: "moo"
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- parameter: "5"
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gx_int_required_via_empty_string:
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<<: *gx_int_required
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gx_int_validation_range:
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request_valid:
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- parameter: 1
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- parameter: 9
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request_invalid:
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- parameter: {}
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- parameter: {__class__: 'ConnectedValue'}
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- parameter: -1
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- parameter: 11
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- parameter: 10
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workflow_step_linked_valid:
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- parameter: {__class__: 'ConnectedValue'}
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gx_int_min_max:
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request_valid:
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- parameter: 1
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- parameter: 9
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- parameter: 10
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request_invalid:
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- parameter: -1
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- parameter: 11
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workflow_step_linked_valid:
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: -1
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gx_text_regex_validation:
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request_valid:
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- parameter: acgt
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- parameter: a
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- parameter: aaaggttac
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request_invalid:
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- parameter: acgu
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- parameter: nucleic
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workflow_step_linked_valid:
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- parameter: {__class__: 'ConnectedValue'}
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gx_text_expression_validation:
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request_valid:
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- parameter: the code was foobar
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- parameter: foobar
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request_invalid:
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- parameter: the code was not foo bar
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- parameter: ''
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workflow_step_linked_valid:
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: ''
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gx_text_empty_validation:
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request_valid:
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- parameter: foobar
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- {}
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request_invalid:
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- parameter: ''
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job_internal_valid:
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- parameter: foobar
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job_internal_invalid:
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- {}
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- parameter: ''
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workflow_step_linked_valid:
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: ''
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gx_text:
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request_valid: &gx_text_request_valid
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- {}
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# need to explicitly mark these as non-optional
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- parameter: null
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request_invalid: &gx_text_request_invalid
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- parameter: 5
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- parameter: {}
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- parameter: { "moo": "cow" }
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- parameter: {__class__: 'ConnectedValue'}
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request_internal_valid:
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*gx_text_request_valid
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request_internal_invalid:
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*gx_text_request_invalid
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request_internal_dereferenced_valid:
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*gx_text_request_valid
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request_internal_dereferenced_invalid:
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*gx_text_request_invalid
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landing_request_valid:
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*gx_text_request_valid
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landing_request_invalid:
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*gx_text_request_invalid
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landing_request_internal_valid:
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*gx_text_request_valid
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landing_request_internal_invalid:
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*gx_text_request_invalid
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job_internal_valid:
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- parameter: null
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job_internal_invalid:
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- {}
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- parameter: { "moo": "cow" }
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workflow_step_valid:
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- {}
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- parameter: null
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workflow_step_invalid:
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- parameter: 5
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- parameter: {}
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- parameter: { "moo": "cow" }
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_valid:
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- {}
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- parameter: {__class__: 'ConnectedValue'}
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- parameter: null
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workflow_step_linked_invalid:
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- parameter: 5
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- parameter: {}
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- parameter: { "moo": "cow" }
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- parameter: {"class": 'ConnectedValue'}
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gx_text_optional:
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request_valid:
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- parameter: null
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request_invalid:
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- parameter: 5
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- parameter: {}
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- parameter: { "moo": "cow" }
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landing_request_valid: &gx_text_optional_landing_request_valid
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- parameter: "moo cow"
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- {}
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- parameter: null
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landing_request_invalid: &gx_text_optional_landing_request_invalid
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- parameter: 5
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- parameter: 6
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landing_request_internal_valid:
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*gx_text_optional_landing_request_valid
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landing_request_internal_invalid:
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*gx_text_optional_landing_request_invalid
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workflow_step_valid:
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- parameter: null
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workflow_step_invalid:
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- parameter: 5
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- parameter: {}
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- parameter: { "moo": "cow" }
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_valid:
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- parameter: moocow
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- parameter: 'some spaces'
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- parameter: ''
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- parameter: null
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: 5
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- parameter: {}
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- parameter: { "moo": "cow" }
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gx_text_length_validation:
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request_valid:
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- parameter: "mytext"
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- parameter: "mytext123"
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request_invalid:
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- parameter: "s" # too short
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- parameter: "mytext1231231231sd" # too long
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gx_text_length_validation_negate:
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request_valid:
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- parameter: "m"
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- parameter: "mytext123mocowdowees"
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request_invalid:
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- parameter: "goldilocks"
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gx_select:
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request_valid:
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- parameter: "--ex1"
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- parameter: "ex2"
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# see API Tests -> test_tools.py -> test_select_first_by_default
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- {}
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request_invalid:
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# Not allowing selecting booleans by truevalue/falsevalue - don't allow selecting
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# selects by label.
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- parameter: "Ex1"
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# Do not allow lists for non-multi-selects
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- parameter: ["ex2"]
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- parameter: null
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- parameter: {}
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- parameter: 5
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request_internal_valid: &gx_select_request_valid
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- parameter: "--ex1"
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- parameter: "ex2"
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request_internal_invalid: &gx_select_request_invalid
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- parameter: {}
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request_internal_dereferenced_valid:
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*gx_select_request_valid
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request_internal_dereferenced_invalid:
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*gx_select_request_invalid
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landing_request_valid: &gx_select_landing_request_valid
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- parameter: "--ex1"
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- parameter: "ex2"
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- {}
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landing_request_invalid: &gx_select_landing_request_invalid
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- parameter: 5
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- parameter: null
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- parameter: "Ex1"
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landing_request_internal_valid:
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*gx_select_landing_request_valid
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landing_request_internal_invalid:
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*gx_select_landing_request_invalid
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job_internal_valid:
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- parameter: '--ex1'
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- parameter: 'ex2'
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job_internal_invalid:
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- {}
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test_case_xml_valid:
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- parameter: 'ex2'
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- parameter: '--ex1'
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- {}
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test_case_xml_invalid:
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- parameter: {}
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- parameter: null
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workflow_step_valid:
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- parameter: "--ex1"
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- {}
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workflow_step_invalid:
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- parameter: 'foobar'
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_valid:
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- parameter: "--ex1"
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- parameter: {__class__: 'ConnectedValue'}
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- {}
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workflow_step_linked_invalid:
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- parameter: 'foobar'
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- parameter: null
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gx_select_optional:
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request_valid:
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- parameter: "--ex1"
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- parameter: "ex2"
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- parameter: null
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- {}
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request_invalid:
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# Not allowing selecting booleans by truevalue/falsevalue - don't allow selecting
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# selects by label.
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- parameter: "Ex1"
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# Do not allow lists for non-multi-selects
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- parameter: ["ex2"]
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- parameter: {}
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- parameter: 5
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landing_request_valid: &gx_select_optional_landing_request_valid
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- parameter: "--ex1"
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- parameter: "ex2"
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- parameter: null
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- {}
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landing_request_invalid: &gx_select_optional_landing_request_invalid
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- parameter: 5
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- parameter: "Ex1"
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- parameter: {}
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landing_request_internal_valid:
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*gx_select_optional_landing_request_valid
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landing_request_internal_invalid:
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*gx_select_optional_landing_request_invalid
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job_internal_valid:
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- parameter: '--ex1'
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- parameter: 'ex2'
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- parameter: null
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job_internal_invalid:
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- parameter: 'invalid'
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- {}
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test_case_xml_valid:
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- {}
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workflow_step_valid:
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- parameter: "--ex1"
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- parameter: "ex2"
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- parameter: null
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- {}
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workflow_step_invalid:
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- parameter: "Ex1"
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- parameter: ["ex2"]
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- parameter: {}
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- parameter: 5
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_valid:
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- parameter: "--ex1"
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- parameter: "ex2"
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- parameter: null
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- {}
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- parameter: {__class__: 'ConnectedValue'}
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workflow_step_linked_invalid:
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- parameter: "Ex1"
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- parameter: ["ex2"]
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- parameter: {}
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- parameter: 5
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gx_select_multiple:
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request_valid:
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- parameter: ["--ex1"]
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- parameter: ["ex2"]
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# ugh... but these aren't optional...
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- parameter: null
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- {}
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request_invalid:
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- parameter: ["Ex1"]
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- parameter: {}
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- parameter: 5
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landing_request_valid: &gx_select_multiple_landing_request_valid
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- parameter: ["--ex1"]
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- parameter: ["ex2"]
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- parameter: null
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- {}
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landing_request_invalid: &gx_select_multiple_landing_request_invalid
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- parameter: 5
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- parameter: ["Ex1"]
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- parameter: {}
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- parameter: false
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landing_request_internal_valid:
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*gx_select_multiple_landing_request_valid
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landing_request_internal_invalid:
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*gx_select_multiple_landing_request_invalid
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workflow_step_valid:
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- parameter: ["--ex1"]
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- parameter: ["ex2"]
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- {} # could come in linked...
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# ... hmmm? this should maybe be invalid right?
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- parameter: null
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job_internal_valid:
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- parameter: ["--ex1"]
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# itd be coool if this was forced to empty list - probably breaks backward compat though...
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- parameter: null
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job_internal_invalid:
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- {}
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- parameter: "--ex1"
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workflow_step_invalid:
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- parameter: ["Ex1"]
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- parameter: {}
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- parameter: 5
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- parameter: {__class__: 'ConnectedValue'}
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- parameter: [{__class__: 'ConnectedValue'}]
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workflow_step_linked_valid:
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- parameter: ["--ex1"]
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- parameter: ["ex2"]
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- parameter: [{__class__: 'ConnectedValue'}]
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- {}
|
|
- parameter: null
|
|
workflow_step_linked_invalid:
|
|
- parameter: ["Ex1"]
|
|
- parameter: {}
|
|
- parameter: 5
|
|
# might be wrong? I guess we would expect the semantic of this to do like a map-over
|
|
# but as far as I am aware that is not implemented https://github.com/galaxyproject/galaxy/issues/18541
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
|
|
gx_select_multiple_optional:
|
|
request_valid:
|
|
- parameter: ["--ex1"]
|
|
- parameter: ["ex2"]
|
|
- {}
|
|
- parameter: null
|
|
request_invalid:
|
|
- parameter: ["Ex1"]
|
|
- parameter: {}
|
|
- parameter: 5
|
|
|
|
gx_select_no_options_validation:
|
|
job_internal_valid:
|
|
- parameter: "--ex1"
|
|
job_internal_invalid:
|
|
- {}
|
|
|
|
gx_genomebuild:
|
|
request_valid:
|
|
- parameter: hg19
|
|
- parameter: hg18
|
|
# implicitly selects top option "?"
|
|
- {}
|
|
request_invalid:
|
|
- parameter: null
|
|
- parameter: 9
|
|
landing_request_valid: &gx_genomebuild_landing_request_valid
|
|
- parameter: hg19
|
|
- parameter: hg18
|
|
- {}
|
|
landing_request_invalid: &gx_genomebuild_landing_request_invalid
|
|
- parameter: null
|
|
- parameter: 9
|
|
landing_request_internal_valid:
|
|
*gx_genomebuild_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_genomebuild_landing_request_invalid
|
|
job_internal_valid:
|
|
- parameter: hg19
|
|
job_internal_invalid:
|
|
- {}
|
|
|
|
gx_genomebuild_optional:
|
|
request_valid:
|
|
- parameter: hg19
|
|
- parameter: hg18
|
|
# these yield actual null parameters instead of ?
|
|
- {}
|
|
- parameter: null
|
|
request_invalid:
|
|
- parameter: 8
|
|
- parameter: true
|
|
landing_request_valid: &gx_genomebuild_optional_landing_request_valid
|
|
- parameter: hg19
|
|
- parameter: hg18
|
|
- {}
|
|
- parameter: null
|
|
landing_request_invalid: &gx_genomebuild_optional_landing_request_invalid
|
|
- parameter: 9
|
|
landing_request_internal_valid:
|
|
*gx_genomebuild_optional_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_genomebuild_optional_landing_request_invalid
|
|
job_internal_valid:
|
|
- parameter: null
|
|
job_internal_invalid:
|
|
- {}
|
|
|
|
gx_genomebuild_multiple:
|
|
request_valid:
|
|
- parameter: ["hg18", hg19"]
|
|
request_invalid:
|
|
- parameter: 6
|
|
# DIVERGES_FROM_CURRENT_API
|
|
- parameter: null
|
|
|
|
gx_directory_uri:
|
|
request_valid:
|
|
- parameter: "gxfiles://foobar/"
|
|
- parameter: "gxfiles://foobar"
|
|
request_invalid:
|
|
- parameter: "justsomestring"
|
|
- parameter: true
|
|
- parameter: null
|
|
landing_request_valid: &gx_directory_uri_landing_request_valid
|
|
- parameter: "gxfiles://foobar/"
|
|
- parameter: "gxfiles://foobar"
|
|
- {}
|
|
landing_request_invalid: &gx_directory_uri_landing_request_invalid
|
|
- parameter: true
|
|
- parameter: null
|
|
- parameter: 8
|
|
landing_request_internal_valid:
|
|
*gx_directory_uri_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_directory_uri_landing_request_invalid
|
|
job_internal_valid:
|
|
- parameter: "gxfiles://foobar/"
|
|
- parameter: "gxfiles://foobar"
|
|
job_internal_invalid:
|
|
- parameter: "justsomestring"
|
|
- parameter: true
|
|
- parameter: null
|
|
|
|
gx_directory_uri_validation:
|
|
request_valid:
|
|
- parameter: "gxfiles://mycoolsource/api/index.json"
|
|
request_invalid:
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
- parameter: "gxfiles://tooshort/index.json"
|
|
- parameter: "gxfiles://mycoolsource/api/wrongex.js"
|
|
- parameter: "gxfiles://mycoolsource/badexp.json"
|
|
workflow_step_linked_valid:
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
- parameter: "gxfiles://mycoolsource/api/index.json"
|
|
workflow_step_linked_invalid:
|
|
- parameter: "gxfiles://tooshort/index.json"
|
|
- parameter: "gxfiles://mycoolsource/api/wrongex.js"
|
|
- parameter: "gxfiles://mycoolsource/badexp.json"
|
|
|
|
gx_hidden:
|
|
request_valid:
|
|
- parameter: moocow
|
|
- parameter: 'some spaces'
|
|
- parameter: ''
|
|
# it will use a default if value is set in definition and no value supplied (see hidden_param.xml)
|
|
- {}
|
|
request_invalid:
|
|
- parameter: null
|
|
- parameter: 5
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
landing_request_valid: &gx_hidden_landing_request_valid
|
|
- parameter: moocow
|
|
- parameter: 'some spaces'
|
|
- parameter: ''
|
|
- {}
|
|
landing_request_invalid: &gx_hidden_landing_request_invalid
|
|
- parameter: null
|
|
- parameter: 5
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
landing_request_internal_valid:
|
|
*gx_hidden_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_hidden_landing_request_invalid
|
|
job_internal_valid:
|
|
- parameter: moocow
|
|
- parameter: 'some spaces'
|
|
- parameter: ''
|
|
job_internal_invalid:
|
|
- {}
|
|
workflow_step_valid:
|
|
- parameter: moocow
|
|
- {}
|
|
workflow_step_invalid:
|
|
- parameter: 5
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
workflow_step_linked_valid:
|
|
- parameter: moocow
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_invalid:
|
|
- parameter: 5
|
|
- parameter: null
|
|
|
|
gx_hidden_optional:
|
|
request_valid:
|
|
- parameter: moocow
|
|
- parameter: 'some spaces'
|
|
- parameter: ''
|
|
- parameter: null
|
|
request_invalid:
|
|
- parameter: 5
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
landing_request_valid: &gx_hidden_optional_landing_request_valid
|
|
- parameter: moocow
|
|
- parameter: 'some spaces'
|
|
- parameter: ''
|
|
- {}
|
|
- parameter: null
|
|
landing_request_invalid: &gx_hidden_optional_landing_request_invalid
|
|
- parameter: 5
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
landing_request_internal_valid:
|
|
*gx_hidden_optional_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_hidden_optional_landing_request_invalid
|
|
workflow_step_valid:
|
|
- parameter: moocow
|
|
- {}
|
|
- parameter: null
|
|
workflow_step_invalid:
|
|
- parameter: 5
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
workflow_step_linked_valid:
|
|
- parameter: moocow
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
- parameter: null
|
|
workflow_step_linked_invalid:
|
|
- parameter: 5
|
|
|
|
gx_hidden_validation:
|
|
request_valid:
|
|
- parameter: "http://mycoolservice.com/api/index.json"
|
|
request_invalid:
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
- parameter: "http://mycoolservice.com/index.json"
|
|
- parameter: "http://mycoolservice.com/api/wrongex.js"
|
|
- parameter: "http://mycoolservice.com/badexp.json"
|
|
workflow_step_linked_valid:
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
- parameter: "http://mycoolservice.com/api/index.json"
|
|
workflow_step_linked_invalid:
|
|
- parameter: "http://mycoolservice.com/index.json"
|
|
- parameter: "http://mycoolservice.com/api/wrongex.js"
|
|
- parameter: "http://mycoolservice.com/badexp.json"
|
|
|
|
gx_float:
|
|
request_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- parameter: 5.0001
|
|
# galaxy parameters created with a value - so doesn't need to appear in request even though non-optional
|
|
- {}
|
|
request_invalid:
|
|
- parameter: null
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
- parameter: { "moo": "cow" }
|
|
job_internal_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
job_internal_invalid:
|
|
- {}
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
- parameter: null
|
|
landing_request_valid:
|
|
- {}
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
landing_request_invalid:
|
|
- parameter: "moo"
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
landing_request_internal_valid:
|
|
- {}
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
landing_request_internal_invalid:
|
|
- parameter: "moo"
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
test_case_xml_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- {}
|
|
test_case_xml_invalid:
|
|
- parameter: null
|
|
- parameter: "5.0"
|
|
- parameter: "5.1"
|
|
workflow_step_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- {}
|
|
workflow_step_invalid:
|
|
- parameterx: 5
|
|
- parameter: 'foobar'
|
|
workflow_step_linked_valid:
|
|
- parameter: 5
|
|
- parameter: 5.4
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_invalid:
|
|
- parameter: null
|
|
- parameter: 'foobar'
|
|
- parameter: {__class__: 'ConnectedValue2'}
|
|
|
|
|
|
gx_float_optional:
|
|
request_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- parameter: 5.0001
|
|
- parameter: null
|
|
- {}
|
|
request_invalid:
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
- parameter: {}
|
|
- parameter: { "moo": "cow" }
|
|
job_internal_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- parameter: null
|
|
job_internal_invalid:
|
|
- {}
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
landing_request_valid:
|
|
- {}
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- parameter: null
|
|
landing_request_invalid:
|
|
- parameter: "moo"
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
landing_request_internal_valid:
|
|
- {}
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- parameter: null
|
|
landing_request_internal_invalid:
|
|
- parameter: "moo"
|
|
- parameter: "5"
|
|
- parameter: "5.0"
|
|
test_case_xml_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- {}
|
|
- parameter: null
|
|
test_case_xml_invalid:
|
|
- parameter: "5.0"
|
|
- parameter: "5.1"
|
|
workflow_step_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- {}
|
|
workflow_step_invalid:
|
|
- parameterx: 5
|
|
- parameter: 'foobar'
|
|
workflow_step_linked_valid:
|
|
- parameter: 5
|
|
- parameter: 5.4
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
- parameter: null
|
|
workflow_step_linked_invalid:
|
|
- parameter: 'foobar'
|
|
- parameter: {__class__: 'ConnectedValue2'}
|
|
|
|
gx_float_validation_range:
|
|
request_valid:
|
|
- parameter: 0.1
|
|
- parameter: 9.7
|
|
- parameter: 5
|
|
request_invalid:
|
|
- parameter: 10
|
|
- parameter: 0
|
|
- parameter: 9.8 # endpoint not included because specified in validator
|
|
|
|
gx_float_min_max:
|
|
request_valid:
|
|
- parameter: 0.1
|
|
- parameter: 9.7
|
|
- parameter: 5
|
|
- parameter: 9.8 # endpoint implicitly included when max attribute set on param
|
|
request_invalid:
|
|
- parameter: 10
|
|
- parameter: 0
|
|
|
|
gx_color:
|
|
request_valid:
|
|
- parameter: '#aabbcc'
|
|
- parameter: '#000000'
|
|
request_invalid:
|
|
- parameter: null
|
|
- parameter: {}
|
|
- parameter: '#abcd'
|
|
workflow_step_valid:
|
|
- parameter: '#aabbcc'
|
|
- parameter: '#000000'
|
|
- {}
|
|
workflow_step_invalid:
|
|
- parameterx: '#aabbcc'
|
|
- parameter: 'foobar'
|
|
- parameter: 5
|
|
workflow_step_linked_valid:
|
|
- parameter: '#aabbcc'
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_invalid:
|
|
- parameter: null
|
|
- parameter: 'foobar'
|
|
- parameter: 5
|
|
- parameter: {__class__: 'ConnectedValue2'}
|
|
|
|
gx_data:
|
|
request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", "ext": "txt"}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: abcdabcd}]}
|
|
request_invalid:
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {src: hda, id: 7}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_valid:
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {src: hda, id: 0}
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}
|
|
request_internal_invalid:
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: abcdabcd}]}
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_dereferenced_valid:
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {src: hda, id: 0}
|
|
request_internal_dereferenced_invalid:
|
|
# the difference between request internal and request internal dereferenced is that these have been converted
|
|
# to datasets.
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}
|
|
landing_request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", "ext": "txt"}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: abcdabcd}]}
|
|
- {}
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", "ext": "txt"}
|
|
landing_request_invalid:
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {src: hda, id: 0}
|
|
landing_request_internal_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- {}
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", "ext": "txt"}
|
|
landing_request_internal_invalid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: abcdabcd}]}
|
|
job_internal_valid:
|
|
- parameter: {src: hda, id: 7}
|
|
job_internal_invalid:
|
|
# valid request but after the job has been created, map/reduce concepts should have been
|
|
# expanded out.
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
# url parameters should be dereferrenced into datasets by this point...
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", "ext": "txt"}
|
|
- {}
|
|
test_case_xml_valid:
|
|
- parameter: {class: File, path: foo.bed}
|
|
- parameter: {class: File, location: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt"}
|
|
test_case_xml_invalid:
|
|
- parameter: foo.bed
|
|
- parameter: null
|
|
- {}
|
|
workflow_step_valid:
|
|
- {}
|
|
workflow_step_invalid:
|
|
- {src: hda, id: abcdabcd}
|
|
- {src: hda, id: 7}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_valid:
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_invalid:
|
|
- {}
|
|
- {src: hda, id: abcdabcd}
|
|
- {src: hda, id: 7}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {__class__: 'ConnectedValueX'}
|
|
|
|
|
|
gx_data_optional:
|
|
request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: null
|
|
- {}
|
|
request_invalid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: null
|
|
- {}
|
|
request_internal_invalid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
job_internal_valid:
|
|
- parameter: null
|
|
- parameter: {src: hda, id: 5}
|
|
job_internal_invalid:
|
|
- {}
|
|
workflow_step_valid:
|
|
- {}
|
|
workflow_step_invalid:
|
|
- {src: hda, id: abcdabcd}
|
|
- {src: hda, id: 7}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_valid:
|
|
- {}
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_invalid:
|
|
- {src: hda, id: abcdabcd}
|
|
- {src: hda, id: 7}
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: {__class__: 'ConnectedValueX'}
|
|
test_case_xml_valid:
|
|
- {}
|
|
- parameter: {class: "File", path: "1.bed"}
|
|
test_case_xml_invalid:
|
|
- parameter: {class: "NotAFile", path: "1.bed"}
|
|
|
|
gx_data_multiple:
|
|
request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: [{src: hda, id: abcdabcd}]
|
|
- parameter: [{src: hdca, id: abcdabcd}]
|
|
- parameter: [{src: hdca, id: abcdabcd}, {src: hda, id: abcdabcd}]
|
|
request_invalid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: [{src: hdca, id: 5}, {src: hda, id: 5}]
|
|
- parameter: null
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: [{src: hda, id: 5}]
|
|
- parameter: [{src: hdca, id: 5}]
|
|
- parameter: [{src: hdca, id: 5}, {src: hda, id: 5}]
|
|
- parameter: [{src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}]
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
request_internal_invalid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: [{src: hdca, id: abcdabcd}, {src: hda, id: abcdabcd}]
|
|
- parameter: null
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_dereferenced_valid:
|
|
- parameter: {__class__: "Batch", values: [{src: hdca, id: 5}]}
|
|
- parameter: [{src: hda, id: 5}]
|
|
- parameter: [{src: hda, id: 0}]
|
|
request_internal_dereferenced_invalid:
|
|
# the difference between request internal and request internal dereferenced is that these have been converted
|
|
# to datasets.
|
|
- parameter: [{src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}]
|
|
landing_request_valid:
|
|
- parameter: [{src: hda, id: abcdabcd}]
|
|
- {}
|
|
landing_request_invalid:
|
|
- parameter: [{src: hda, id: 6}]
|
|
landing_request_internal_valid:
|
|
- parameter: [{src: hda, id: 6}]
|
|
- {}
|
|
landing_request_internal_invalid:
|
|
- parameter: [{src: hda, id: abcdabcd}]
|
|
job_internal_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: [{src: hda, id: 5}, {src: hda, id: 6}]
|
|
job_internal_invalid:
|
|
- {}
|
|
|
|
gx_data_multiple_optional:
|
|
request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: [{src: hda, id: abcdabcd}]
|
|
- parameter: [{src: hdca, id: abcdabcd}]
|
|
- parameter: [{src: hdca, id: abcdabcd}, {src: hda, id: abcdabcd}]
|
|
- parameter: null
|
|
- {}
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}
|
|
- parameter: [{src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}]
|
|
request_invalid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: [{src: hda, id: 5}]
|
|
- parameter: [{src: hdca, id: 5}]
|
|
- parameter: [{src: hdca, id: 5}, {src: hda, id: 5}]
|
|
- parameter: null
|
|
- {}
|
|
- parameter: [{src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}]
|
|
request_internal_invalid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_dereferenced_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
request_internal_dereferenced_invalid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
- parameter: [{src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}]
|
|
- parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"}
|
|
job_internal_valid:
|
|
- parameter: {src: hda, id: 5}
|
|
- parameter: [{src: hda, id: 5}, {src: hda, id: 6}]
|
|
- parameter: null
|
|
job_internal_invalid:
|
|
- {}
|
|
|
|
gx_data_collection:
|
|
request_valid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
request_invalid:
|
|
- parameter: {src: hdca, id: 7}
|
|
- parameter: null
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
request_internal_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
request_internal_dereferenced_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
request_internal_dereferenced_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
landing_request_valid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- {}
|
|
landing_request_invalid:
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: [{src: hdca, id: abcdabcd}]
|
|
landing_request_internal_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
- {}
|
|
landing_request_internal_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: [{src: hdca, id: abcdabcd}]
|
|
workflow_step_valid:
|
|
- {}
|
|
workflow_step_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: 5
|
|
- parameter: {}
|
|
workflow_step_linked_valid:
|
|
- parameter: {__class__: 'ConnectedValue'}
|
|
workflow_step_linked_invalid:
|
|
- {}
|
|
test_case_xml_valid:
|
|
- parameter: {class: Collection, collection_type: list, elements: []}
|
|
- parameter:
|
|
class: Collection
|
|
collection_type: list
|
|
elements:
|
|
- {identifier: "first", path: "1.bed", class: File}
|
|
- {identifier: "second", path: "2.bed", class: File}
|
|
- parameter:
|
|
name: "A nested listed with a name"
|
|
class: Collection
|
|
collection_type: "list:paired"
|
|
elements:
|
|
- class: Collection
|
|
collection_type: paired
|
|
identifier: first_el
|
|
elements:
|
|
- {identifier: "forward", path: "1_f.bed", class: File}
|
|
- {identifier: "reverse", path: "1_r.bed", class: File}
|
|
test_case_xml_invalid:
|
|
# collection type is required
|
|
- parameter: {class: Collection, elements: []}
|
|
- parameter:
|
|
class: Collection
|
|
collection_type: list
|
|
elements:
|
|
- {identifier: "first", path: "1.bed", class: NotAFile}
|
|
- parameter:
|
|
class: Collection
|
|
collection_type: list
|
|
elements:
|
|
- {identifier: "first", pathmisspelled: "1.bed", class: File}
|
|
- parameter:
|
|
name: "A nested listed with a name"
|
|
class: Collection
|
|
collection_type: "list:paired"
|
|
elements:
|
|
- class: Collection
|
|
collection_type: paired
|
|
identifier: first_el
|
|
elements:
|
|
- {identifier: "forward", path: "1_f.bed", class: File}
|
|
- {identifier: "reverse", path: "1_r.bed", class: FileX}
|
|
job_internal_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
job_internal_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- {}
|
|
|
|
gx_data_collection_optional:
|
|
request_valid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- {}
|
|
request_invalid:
|
|
- parameter: {src: hdca, id: 7}
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
- parameter: {}
|
|
request_internal_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: null
|
|
- {}
|
|
request_internal_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
- parameter: {}
|
|
landing_request_valid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- {}
|
|
landing_request_invalid:
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: [{src: hdca, id: abcdabcd}]
|
|
landing_request_internal_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: null
|
|
- {}
|
|
landing_request_internal_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: [{src: hdca, id: abcdabcd}]
|
|
job_internal_valid:
|
|
- parameter: {src: hdca, id: 5}
|
|
- parameter: null
|
|
job_internal_invalid:
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- {}
|
|
|
|
gx_conditional_boolean:
|
|
request_valid:
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
integer_parameter: 1
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
integer_parameter: 2
|
|
- conditional_parameter:
|
|
test_parameter: false
|
|
boolean_parameter: true
|
|
# Test parameter has default and so does it "case" - so this should be fine
|
|
- {}
|
|
# The boolean_parameter is optional so just setting a test_parameter is fine
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
- conditional_parameter:
|
|
test_parameter: false
|
|
# if test parameter is missing, it should be false in this case (TODO: test inverse)
|
|
# so boolean_parameter or either type or missing should be fine.
|
|
- conditional_parameter:
|
|
boolean_parameter: true
|
|
- conditional_parameter:
|
|
boolean_parameter: false
|
|
- conditional_parameter: {}
|
|
request_invalid:
|
|
- conditional_parameter:
|
|
test_parameter: false
|
|
integer_parameter: 1
|
|
- conditional_parameter:
|
|
test_parameter: null
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
integer_parameter: "1"
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
integer_parameter: null
|
|
# if test parameter is missing, it should be false in this case
|
|
# in that case having an integer_parameter is not acceptable.
|
|
- conditional_parameter:
|
|
integer_parameter: 5
|
|
landing_request_valid: &gx_conditional_boolean_landing_request_valid
|
|
- {}
|
|
landing_request_invalid: &gx_conditional_boolean_landing_request_invalid
|
|
- conditional_parameter:
|
|
test_parameter: false
|
|
integer_parameter: 1
|
|
landing_request_internal_valid:
|
|
*gx_conditional_boolean_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_conditional_boolean_landing_request_invalid
|
|
job_internal_valid:
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
integer_parameter: 1
|
|
- conditional_parameter:
|
|
test_parameter: false
|
|
boolean_parameter: false
|
|
job_internal_invalid:
|
|
# missing defaults are fine in request, but job_internal records parameters used,
|
|
# must include defaults.
|
|
- {}
|
|
- conditional_parameter: {}
|
|
- conditional_parameter:
|
|
test_parameter: true
|
|
- conditional_parameter:
|
|
boolean_parameter: true
|
|
|
|
gx_conditional_boolean_checked:
|
|
request_valid:
|
|
# if no test parameter is defined, the default is 'checked' so the test
|
|
# parameter is true.
|
|
- conditional_parameter:
|
|
integer_parameter: 5
|
|
- conditional_parameter:
|
|
integer_parameter: 0
|
|
|
|
request_invalid:
|
|
# if test parameter is missing, it should be true (it is 'checked') in this case
|
|
# in that case having a boolean_parameter is not acceptable.
|
|
- conditional_parameter:
|
|
boolean_parameter: false
|
|
|
|
job_internal_invalid:
|
|
- conditional_parameter: {}
|
|
- {}
|
|
|
|
gx_conditional_conditional_boolean:
|
|
request_valid:
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: false
|
|
boolean_parameter: true
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
inner_conditional_parameter:
|
|
inner_test_parameter: true
|
|
integer_parameter: 5
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
inner_conditional_parameter:
|
|
inner_test_parameter: false
|
|
boolean_parameter: true
|
|
# Test parameter has default and so does it "case" - so this should be fine
|
|
- {}
|
|
- outer_conditional_parameter: {}
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
inner_conditional_parameter: {}
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
request_invalid:
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
boolean_parameter: true
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
inner_conditional_parameter:
|
|
inner_test_parameter: false
|
|
integer_parameter: 5
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
inner_conditional_parameter:
|
|
inner_test_parameter: true
|
|
integer_parameter: true
|
|
job_internal_invalid:
|
|
- {}
|
|
- outer_conditional_parameter: {}
|
|
- outer_conditional_parameter: {}
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
inner_conditional_parameter: {}
|
|
- outer_conditional_parameter:
|
|
outer_test_parameter: true
|
|
|
|
gx_conditional_select:
|
|
request_valid:
|
|
- conditional_parameter:
|
|
test_parameter: a
|
|
integer_parameter: 1
|
|
- conditional_parameter:
|
|
test_parameter: a
|
|
integer_parameter: 2
|
|
- conditional_parameter:
|
|
test_parameter: b
|
|
boolean_parameter: true
|
|
# Test parameter has default and so does it "case" - so this should be fine
|
|
- {}
|
|
# # The select is optional so just setting a test_parameter is fine
|
|
- conditional_parameter:
|
|
integer_parameter: 1
|
|
request_invalid:
|
|
- conditional_parameter:
|
|
test_parameter: b
|
|
integer_parameter: 1
|
|
- conditional_parameter:
|
|
test_parameter: null
|
|
- conditional_parameter:
|
|
test_parameter: a
|
|
integer_parameter: "1"
|
|
- conditional_parameter:
|
|
test_parameter: b
|
|
integer_parameter: null
|
|
# if test parameter is missing, it should be false in this case
|
|
# in that case having an integer_parameter is not acceptable.
|
|
- conditional_parameter:
|
|
boolean_parameter: true
|
|
job_internal_valid:
|
|
- conditional_parameter:
|
|
test_parameter: a
|
|
integer_parameter: 1
|
|
- conditional_parameter:
|
|
test_parameter: b
|
|
boolean_parameter: true
|
|
job_internal_invalid:
|
|
- {}
|
|
- conditional_parameter:
|
|
integer_parameter: 1
|
|
- conditional_parameter: null
|
|
- conditional_parameter: {}
|
|
|
|
gx_repeat_boolean:
|
|
request_valid:
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- parameter: []
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
- parameter: [{}]
|
|
- parameter: [{}, {}]
|
|
request_invalid:
|
|
- parameter:
|
|
- { boolean_parameter: 4 }
|
|
- parameter:
|
|
- { foo: 4 }
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
- { boolean_parameter: 4 }
|
|
- parameter: 5
|
|
landing_request_valid: &gx_repeat_boolean_landing_request_valid
|
|
- {}
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
- parameter: [{}]
|
|
- parameter: [{}, {}]
|
|
landing_request_invalid: &gx_repeat_boolean_landing_request_invalid
|
|
- parameter:
|
|
- { boolean_parameter: 4 }
|
|
landing_request_internal_valid:
|
|
*gx_repeat_boolean_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_repeat_boolean_landing_request_invalid
|
|
job_internal_valid:
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- parameter: []
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
job_internal_invalid:
|
|
- parameter: [{}]
|
|
- parameter: [{}, {}]
|
|
|
|
|
|
gx_repeat_boolean_min:
|
|
request_valid:
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
- parameter: [{}, {}]
|
|
# even though a minimum is set here - each instance of the repeat does not require a value
|
|
# so we can skip the repeat all together and Galaxy I think will just use the defaults at
|
|
# each stage - see API tests -> test_tool_execute.py -> test_optional_repeats_with_mins_filled_id
|
|
- {}
|
|
request_invalid:
|
|
- parameter: []
|
|
- parameter: [{}]
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- parameter:
|
|
- { boolean_parameter: 4 }
|
|
- parameter:
|
|
- { foo: 4 }
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
- { boolean_parameter: 4 }
|
|
- parameter: 5
|
|
job_internal_valid:
|
|
- parameter:
|
|
- { boolean_parameter: true }
|
|
- { boolean_parameter: false }
|
|
job_internal_invalid:
|
|
- parameter: [{}, {}]
|
|
- parameter: []
|
|
test_case_xml_valid:
|
|
- {}
|
|
|
|
gx_repeat_data:
|
|
request_valid:
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
- parameter: []
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
# an empty repeat is fine
|
|
- {}
|
|
- parameter:
|
|
- { data_parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"} }
|
|
request_invalid:
|
|
- parameter: [{}, {}]
|
|
- parameter: [{}]
|
|
- parameter: 5
|
|
request_internal_valid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
- parameter:
|
|
- { data_parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"} }
|
|
request_internal_invalid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: abcdabcd } }
|
|
landing_request_valid: &gx_repeat_data_landing_request_valid
|
|
- {}
|
|
# unlike above - in landing mode all parameters are optional so it is find to have an unset data parameters
|
|
- parameter: [{}]
|
|
landing_request_invalid: &gx_repeat_data_landing_request_invalid
|
|
- parameter: 5
|
|
landing_request_internal_valid:
|
|
*gx_repeat_data_landing_request_valid
|
|
landing_request_internal_invalid:
|
|
*gx_repeat_data_landing_request_invalid
|
|
job_internal_valid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
job_internal_invalid:
|
|
- parameter: null
|
|
- parameter: {}
|
|
- parameter:
|
|
- { data_parameter: {src: url, url: "https://raw.githubusercontent.com/galaxyproject/planemo/7be1bf5b3971a43eaa73f483125bfb8cabf1c440/tests/data/hello.txt", ext: "txt"} }
|
|
|
|
gx_repeat_data_min:
|
|
request_valid:
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
request_invalid:
|
|
# data isn't optional and so we need at least one list element
|
|
- {}
|
|
- parameter: []
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
- parameter: [{}, {}]
|
|
- parameter: [{}]
|
|
- parameter: 5
|
|
landing_request_valid:
|
|
- {}
|
|
# ignore the min here - can just specify the first set of parameters and I think that should work
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
landing_request_invalid:
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: 5} }
|
|
landing_request_internal_valid:
|
|
- {}
|
|
# ignore the min here - can just specify the first set of parameters and I think that should work
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: 5} }
|
|
landing_request_internal_invalid:
|
|
- parameter:
|
|
- { data_parameter: {src: hda, id: abcdabcd} }
|
|
request_internal_valid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
request_internal_invalid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: abcdabcd } }
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
job_internal_valid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
- { data_parameter: { src: hda, id: 6 } }
|
|
job_internal_invalid:
|
|
- parameter:
|
|
- { data_parameter: { src: hda, id: 5 } }
|
|
- parameter:
|
|
- {}
|
|
- parameter: {}
|
|
|
|
|
|
gx_section_boolean:
|
|
request_valid:
|
|
- parameter: { boolean_parameter: true }
|
|
# booleans are optional in requests, so this should be fine?
|
|
- {}
|
|
request_invalid:
|
|
- parameter: { boolean_parameter: 4 }
|
|
job_internal_valid:
|
|
- parameter: { boolean_parameter: true }
|
|
job_internal_invalid:
|
|
- {}
|
|
- parameter: { boolean_parameter: 4 }
|
|
|
|
|
|
gx_section_data:
|
|
request_valid:
|
|
- parameter: { data_parameter: { src: hda, id: abcdabcd } }
|
|
request_invalid:
|
|
- parameter: { data_parameter: 4 }
|
|
- parameter: { data_parameter: { src: hda, id: 5 } }
|
|
- {}
|
|
request_internal_valid:
|
|
- parameter: { data_parameter: { src: hda, id: 5 } }
|
|
request_internal_invalid:
|
|
- parameter: { data_parameter: { src: hda, id: abcdabcd } }
|
|
- {}
|
|
job_internal_valid:
|
|
- parameter: { data_parameter: { src: hda, id: 5 } }
|
|
job_internal_invalid:
|
|
- {}
|
|
|
|
gx_drill_down_exact:
|
|
request_valid:
|
|
- parameter: aa
|
|
- parameter: bbb
|
|
- parameter: ba
|
|
# non-leaf nodes seem to be selectable in exact mode
|
|
- parameter: a
|
|
request_invalid:
|
|
- parameter: c
|
|
- parameter: {}
|
|
# no implicit default currently - see test_drill_down_first_by_default in API test test_tools.py.
|
|
- {}
|
|
- parameter: null
|
|
job_internal_valid:
|
|
- parameter: aa
|
|
job_internal_invalid:
|
|
- parameter: c
|
|
- {}
|
|
|
|
gx_drill_down_exact_with_selection:
|
|
request_valid:
|
|
- parameter: aa
|
|
- parameter: bbb
|
|
- parameter: ba
|
|
# non-leaf nodes seem to be selectable in exact mode
|
|
- parameter: a
|
|
request_invalid:
|
|
- parameter: c
|
|
# see note above no implicit selection
|
|
- parameter: {}
|
|
- parameter: null
|
|
job_internal_valid:
|
|
- parameter: aa
|
|
job_internal_invalid:
|
|
- parameter: c
|
|
- parameter: null
|
|
- {}
|
|
|
|
gx_drill_down_recurse:
|
|
request_valid:
|
|
- parameter: bba
|
|
request_invalid:
|
|
- parameter: a
|
|
- parameter: c
|
|
|
|
gx_drill_down_recurse_multiple:
|
|
request_valid:
|
|
- parameter: [bba]
|
|
- parameter: [a]
|
|
request_invalid:
|
|
- parameter: c
|
|
|
|
gx_data_column:
|
|
request_valid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: 0 }
|
|
request_invalid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: "0" }
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: [ 0 ] }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: 0 }
|
|
request_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: "0" }
|
|
job_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: 0 }
|
|
job_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 123} }
|
|
- { }
|
|
test_case_xml_valid:
|
|
- { ref_parameter: {class: "File", path: "1.bed"}, parameter: 3 }
|
|
test_case_xml_invalid:
|
|
- { ref_parameter: {class: "File", path: "1.bed"}, parameter: "3" }
|
|
test_case_xml_invalid:
|
|
- { ref_parameter: {class: "File", path: "1.bed"}, parameter: "c2: With name" }
|
|
|
|
gx_data_column_optional:
|
|
request_valid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: 0 }
|
|
- { ref_parameter: {src: hda, id: abcdabcd} }
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: null }
|
|
request_invalid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: "0" }
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: [ 0 ] }
|
|
job_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 1}, parameter: 0 }
|
|
- { ref_parameter: {src: hda, id: 1}, parameter: null }
|
|
job_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 1} }
|
|
- { }
|
|
- { ref_parameter: {src: hda, id: 1}, parameter: "0" }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: 0 }
|
|
request_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: "0" }
|
|
|
|
gx_data_column_multiple:
|
|
request_valid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: [0] }
|
|
request_invalid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: "0" }
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: ["0"] }
|
|
- { ref_parameter: {src: hda, id: abcdabcd} }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: [0] }
|
|
job_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: [0] }
|
|
job_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: ["0"] }
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: null }
|
|
request_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: "0" }
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: 0 }
|
|
|
|
gx_data_column_multiple_accept_default:
|
|
request_valid:
|
|
- { ref_parameter: {src: hda, id: abcdabcd}, parameter: [0] }
|
|
- { ref_parameter: {src: hda, id: abcdabcd} }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: [0] }
|
|
job_internal_valid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: [0] }
|
|
job_internal_invalid:
|
|
- { ref_parameter: {src: hda, id: 123}, parameter: ["0"] }
|
|
|
|
gx_group_tag:
|
|
request_valid:
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 'type:matched' }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 'matched' }
|
|
request_invalid:
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: null }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 7 }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: true }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd} }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: 'type: matched' }
|
|
request_internal_invalid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: null }
|
|
|
|
gx_group_tag_optional:
|
|
request_valid:
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 'type:matched' }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 'matched' }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd} }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: null }
|
|
request_invalid:
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 7 }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: true }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: 'type: matched' }
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: null }
|
|
request_internal_invalid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: 8 }
|
|
job_internal_valid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: null }
|
|
- { ref_parameter: { src: hdca, id: 123}, parameter: "matched" }
|
|
job_internal_invalid:
|
|
- { ref_parameter: {src: hdca, id: 123} }
|
|
|
|
|
|
gx_group_tag_multiple:
|
|
request_valid:
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: ['type:matched'] }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: ['matched'] }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: ['matched'] }
|
|
request_invalid:
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 'matched' }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: 7 }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: true }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd}, parameter: null }
|
|
- { ref_parameter: { src: hdca, id: abcdabcd} }
|
|
request_internal_valid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: ['type: matched'] }
|
|
request_internal_invalid:
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: 8 }
|
|
- { ref_parameter: {src: hdca, id: 123}, parameter: null }
|
|
job_internal_valid:
|
|
- { ref_parameter: { src: hdca, id: 123}, parameter: ['matched'] }
|
|
job_internal_invalid:
|
|
- { ref_parameter: { src: hdca, id: 123} }
|
|
- { ref_parameter: { src: hdca, id: 123}, parameter: null }
|
|
|
|
|
|
|
|
cwl_int:
|
|
request_valid:
|
|
- parameter: 5
|
|
request_invalid:
|
|
- parameter: "5"
|
|
- {}
|
|
- parameter: null
|
|
- parameter: "None"
|
|
|
|
|
|
# TODO: Not a thing perhaps?
|
|
# cwl_null:
|
|
# request_valid:
|
|
# - parameter: null
|
|
# - {}
|
|
# request_invalid:
|
|
# - parameter: "5"
|
|
# - parameter: 5
|
|
# - parameter: {}
|
|
|
|
cwl_int_optional:
|
|
request_valid:
|
|
- parameter: 5
|
|
- parameter: null
|
|
request_invalid:
|
|
- parameter: "5"
|
|
- {}
|
|
- parameter: "None"
|
|
|
|
cwl_float:
|
|
request_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
request_invalid:
|
|
- parameter: null
|
|
- parameter: "5"
|
|
- {}
|
|
- parameter: "None"
|
|
|
|
cwl_float_optional:
|
|
request_valid:
|
|
- parameter: 5
|
|
- parameter: 5.0
|
|
- parameter: null
|
|
request_invalid:
|
|
- parameter: "5"
|
|
- {}
|
|
- parameter: "None"
|
|
|
|
cwl_string:
|
|
request_valid:
|
|
- parameter: "moo"
|
|
- parameter: ""
|
|
request_invalid:
|
|
- parameter: null
|
|
- {}
|
|
- parameter: 5
|
|
|
|
cwl_string_optional:
|
|
request_valid:
|
|
- parameter: "moo"
|
|
- parameter: ""
|
|
- parameter: null
|
|
request_invalid:
|
|
- {}
|
|
- parameter: 5
|
|
|
|
cwl_boolean:
|
|
request_valid:
|
|
- parameter: true
|
|
- parameter: false
|
|
request_invalid:
|
|
- parameter: null
|
|
- {}
|
|
- parameter: 5
|
|
- parameter: "true"
|
|
- parameter: "True"
|
|
|
|
cwl_boolean_optional:
|
|
request_valid:
|
|
- parameter: true
|
|
- parameter: false
|
|
- parameter: null
|
|
request_invalid:
|
|
- {}
|
|
- parameter: 5
|
|
- parameter: "true"
|
|
- parameter: "True"
|
|
|
|
cwl_file:
|
|
request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
request_invalid:
|
|
- parameter: {src: hda, id: 7}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
|
|
cwl_directory:
|
|
request_valid:
|
|
- parameter: {src: hda, id: abcdabcd}
|
|
request_invalid:
|
|
- parameter: {src: hda, id: 7}
|
|
- parameter: {src: hdca, id: abcdabcd}
|
|
- parameter: null
|
|
- parameter: {src: fooda, id: abcdabcd}
|
|
- parameter: {id: abcdabcd}
|
|
- parameter: {}
|
|
- {}
|
|
- parameter: true
|
|
- parameter: 5
|
|
- parameter: "5"
|
|
|