mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-21 13:50:20 +08:00
55 lines
2.0 KiB
Python
Executable File
55 lines
2.0 KiB
Python
Executable File
"""
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usage: fetch_eggs.py [egg_name] [platform]
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With no arguments, fetches all eggs necessary according to the
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settings in universe_wsgi.ini.
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egg_name - Fetch only this egg (as defined in eggs.ini) or 'all' for
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all eggs (even those not required by your settings).
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platform - Fetch eggs for a specific platform (if not provided, fetch
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eggs for *this* platform). Useful for fetching eggs for cluster
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nodes which are of a different architecture than the head node.
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Platform name can be determined with the get_platforms.py script.
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"""
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import os, sys, logging
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root = logging.getLogger()
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root.setLevel( 10 )
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root.addHandler( logging.StreamHandler( sys.stdout ) )
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lib = os.path.abspath( os.path.join( os.path.dirname( __file__ ), "..", "lib" ) )
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sys.path.append( lib )
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from galaxy.eggs import *
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c = Crate()
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if len( sys.argv ) == 3:
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c.platform = { 'peak' : sys.argv[2].rsplit('-',1)[0], 'galaxy' : sys.argv[2] }
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c.parse()
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try:
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if len( sys.argv ) == 1:
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galaxy_config = GalaxyConfig()
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ignore = []
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for name in c.get_names():
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if not galaxy_config.check_conditional( name ):
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ignore.append( name )
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c.fetch( ignore=ignore )
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else:
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if sys.argv[1] == 'all':
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c.fetch()
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else:
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egg = c.get( sys.argv[1] )
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if egg is None:
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print "error: %s not in eggs.ini" % sys.argv[1]
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sys.exit( 1 )
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egg.fetch()
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except EggNotFetchable, e:
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print "One of the python eggs necessary to run Galaxy couldn't be downloaded"
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print "automatically. You may want to try building it by hand with:"
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print " python scripts/scramble.py %s" % e
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sys.exit( 1 )
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except PlatformNotSupported, e:
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print "Your platform (%s) is not supported." % e
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print "Pre-built galaxy eggs are not available from the Galaxy developers for"
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print "your platform. You may be able to build them by hand with:"
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print " python scripts/scramble.py"
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sys.exit( 1 )
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