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John Chilton
8a58711e39
This does undo an attempt that Nate made to auto sniff fastq.gz files when they can't be converted anyway, but that was kind of broken in its own way. From Gitter: jmchilton: natefoo "# Link mode can't decompress anyway, so enable sniffing for keep-compressed datatypes even when auto_decompress is enabled" Did you test this hack? I get the thought process but it seems like it results in uploaded fastq.gz files defaulting to fastqcssanger.gz? Maybe it didn't at some point though? Nate Coraor: ummmmmmmmmmmm maybe probably not John Chilton: I have four fixes for compressed datatypes that all fall apart because of this hack... can I just use the configured sniff order or do you want me to try to preserve this and write a test case Nate Coraor: nah go ahead and de-hack John Chilton: There is a good argument to be made for making the behavior more consistent anyway right? Cool thanks