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Helena Rasche
27 lines
949 B
XML
27 lines
949 B
XML
<tool id="genbank" name="Connect to Genbank" version="1.0.0">
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<!-- <description>queries genbank</description> -->
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<edam_operations>
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<edam_operation>operation_0224</edam_operation>
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</edam_operations>
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<command><![CDATA[
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python '$__tool_directory__/genbank.py' $mode '$text' '$output'
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]]></command>
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<inputs>
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<param name="mode" type="select" label="Get sequences from the">
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<option value="nucleotide">nucleotide database</option>
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<option value="protein">proteins database</option>
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</param>
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<param name="text" type="text" value="6273291" label="with accession ID" />
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</inputs>
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<outputs>
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<data name="output" format="fasta" />
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</outputs>
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<help><![CDATA[
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At the moment this tool allows the following simple searches:
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- by GI: **51594135**
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- by accession: **CF622840**
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- using text: **human hbb1** (this feature is experimental)
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]]></help>
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</tool>
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