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galaxy/tools/emboss/emboss_dreg.xml
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<tool id="EMBOSS: dreg27" name="dreg" version="4.0.0">
<description>Regular expression search of a nucleotide sequence</description>
<command>dreg -sequence $input1 -outfile $out_file1 -pattern "$pattern" -auto</command>
<inputs>
<param format="data" name="input1" type="data">
<label>Sequence 1</label>
</param>
<param name="pattern" size="50" type="text" value="(AUG)">
<label>Regular expression pattern</label>
</param>
</inputs>
<outputs>
<data format="txt" name="out_file1" />
</outputs>
<help>
You can view the original documentation here_.
.. _here: http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/dreg.html
</help>
</tool>