Jeremy Goecks 9786652aa9 Fixes to item embedding in pages. In particular, fixed the editor color changes that were occurring when moving the cursor through embedded items.

2010-03-16 12:00:10 -04:00

..

admin

lims: automatic update of sample state when the state is changed in th db (using scanner etc)

2010-03-15 12:40:30 -04:00

cloud

Removed the requirement for a user to select a storage volume zone during UCI registration by adding '(any)' option in the dropdown menu followed by automatic selection.

2009-12-17 08:25:31 -05:00

dataset

Add functionality for inline editing of dataset tags and annotation in history panel (icons are currently opposite save/rerun icons). Various style and template fixes as well.

2010-03-15 11:31:14 -04:00

genetrack

Added the missing "invalid.html" for GeneTrack.

2009-01-29 11:11:15 -05:00

history

Make the login/register/logout sequence more user friendly. Specific changes: (a) use panels so that Galaxy masthead is always available; (b) provide links to guide users past login; (c) enable 'user' to be an active view; (d) updated functional tests.

2010-03-14 11:49:44 -04:00

library

Fix for deleting a list of library datasets - resolves ticket # 102.

2010-03-10 11:24:49 -05:00

mobile

Re-display private roles on permissions forms *only if* woring in the admin view. A lot of code cleanup and bug fixes related to uploading library datasets and setting access permissions on them at upload as well as some security cleanup and fixes. Fix the "Your changes completed successfully." message in the Edit Attributes page. Pass the "use_panels" param around the library methods so the matshead will re-appear when the user browses the library ( obvioulsy needs improvement, but at least for now there is now a way to get eh masthead back ).

2010-03-09 11:28:21 -05:00

page

Fixes to item embedding in pages. In particular, fixed the editor color changes that were occurring when moving the cursor through embedded items.

2010-03-16 12:00:10 -04:00

requests

lims: automatic update of sample state when the state is changed in th db (using scanner etc)

2010-03-15 12:40:30 -04:00

root

Add functionality for inline editing of dataset tags and annotation in history panel (icons are currently opposite save/rerun icons). Various style and template fixes as well.

2010-03-15 11:31:14 -04:00

sample

Request events & request rejection (resolves issue #221)

2009-11-25 14:06:28 -05:00

tracks

trackster:

2010-02-19 17:54:44 -05:00

user

Make the login/register/logout sequence more user friendly. Specific changes: (a) use panels so that Galaxy masthead is always available; (b) provide links to guide users past login; (c) enable 'user' to be an active view; (d) updated functional tests.

2010-03-14 11:49:44 -04:00

visualization

Make the login/register/logout sequence more user friendly. Specific changes: (a) use panels so that Galaxy masthead is always available; (b) provide links to guide users past login; (c) enable 'user' to be an active view; (d) updated functional tests.

2010-03-14 11:49:44 -04:00

workflow

Fixes to item embedding in pages. In particular, fixed the editor color changes that were occurring when moving the cursor through embedded items.

2010-03-16 12:00:10 -04:00

base_panels.mako

Make the login/register/logout sequence more user friendly. Specific changes: (a) use panels so that Galaxy masthead is always available; (b) provide links to guide users past login; (c) enable 'user' to be an active view; (d) updated functional tests.

2010-03-14 11:49:44 -04:00

base.mako

Add 'metas()' %def to base.mako, to allow subclassing templates to declare additional <meta/> tags.

2010-03-12 12:03:25 -05:00

display_base.mako

Add functionality for inline editing of dataset tags and annotation in history panel (icons are currently opposite save/rerun icons). Various style and template fixes as well.

2010-03-15 11:31:14 -04:00

display_common.mako

UI Improvements:

2010-03-12 14:27:04 -05:00

embed_base.mako

Fixes to item embedding in pages. In particular, fixed the editor color changes that were occurring when moving the cursor through embedded items.

2010-03-16 12:00:10 -04:00

form.mako

Make the login/register/logout sequence more user friendly. Specific changes: (a) use panels so that Galaxy masthead is always available; (b) provide links to guide users past login; (c) enable 'user' to be an active view; (d) updated functional tests.

2010-03-14 11:49:44 -04:00

grid_base_async.mako

Add functionality for inline editing of dataset tags and annotation in history panel (icons are currently opposite save/rerun icons). Various style and template fixes as well.

2010-03-15 11:31:14 -04:00

grid_base.mako

UI Improvements:

2010-03-12 14:27:04 -05:00

grid_common.mako

Added sharing options to pages and refactored sharing/display code to create a common code base. Also small additions to grid framework and bug fixes for pages.

2010-01-24 17:38:05 -05:00

message.mako

Make the login/register/logout sequence more user friendly. Specific changes: (a) use panels so that Galaxy masthead is always available; (b) provide links to guide users past login; (c) enable 'user' to be an active view; (d) updated functional tests.

2010-03-14 11:49:44 -04:00

no_access.mako

You can now require that users log in to use Galaxy. The sample config is way different but it's only because I cleaned it up a bit. The only new options are require_login/allow_user_creation.

2008-11-20 15:14:47 -05:00

panels.mako

Make visualizations sharable, publishable, taggable, and annotate-able. Plumbing code is in place, but UI code needs work; in particular, viewing a shared/published visualization is empty and annotations are available only via edit attributes.

2010-03-12 09:37:22 -05:00

share_base.mako

Added sharing options to pages and refactored sharing/display code to create a common code base. Also small additions to grid framework and bug fixes for pages.

2010-01-24 17:38:05 -05:00

sharing_base.mako

Rudimentary support for embedding of histories, datasets, and workflows into pages. Specifics: (1) added menus for inserting links to galaxy items and for embedding items to page editor; (2) framework code for producing HTML for embedded items on page display; and (3) toggling to display/hide embedded item content.

2010-02-12 16:45:37 -05:00

tagging_common.mako

Add functionality for inline editing of dataset tags and annotation in history panel (icons are currently opposite save/rerun icons). Various style and template fixes as well.

2010-03-15 11:31:14 -04:00

tool_executed.mako

Fix for issue #210, redirect to the proper path when the tool executed form is instructed to redirect.

2009-11-11 14:41:32 -05:00

tool_form.mako

Fix typo in last commit.

2010-01-14 15:22:10 -05:00