mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
John Chilton
606c32998f
- New upload tab for "Collections". - This has a new option to select "Collection Type" in footer. - Collection upload geared toward homogeneous datasets - must specify genome and file format for all files. - New button "Build" after all individual datasets have finished their upload to the server. - Clicking "Build" launches the appropriate collection builder for selected collection type. - By default, uploading a collection hides the original uploaded datasets (can be unchecked). Implement tests for all uploaded collection types.
107 lines
4.2 KiB
Python
107 lines
4.2 KiB
Python
from .framework import (
|
|
SeleniumTestCase,
|
|
selenium_test,
|
|
UsesHistoryItemAssertions,
|
|
)
|
|
|
|
|
|
class UploadsTestCase(SeleniumTestCase, UsesHistoryItemAssertions):
|
|
|
|
@selenium_test
|
|
def test_upload_simplest(self):
|
|
self.perform_upload(self.get_filename("1.sam"))
|
|
|
|
self.history_panel_wait_for_hid_ok(1)
|
|
history_contents = self.current_history_contents()
|
|
history_count = len(history_contents)
|
|
assert history_count == 1, "Incorrect number of items in history - expected 1, found %d" % history_count
|
|
|
|
hda = history_contents[0]
|
|
assert hda["name"] == '1.sam'
|
|
assert hda["extension"] == "sam"
|
|
|
|
self.history_panel_click_item_title(hid=1, wait=True)
|
|
self.assert_item_dbkey_displayed_as(1, "?")
|
|
|
|
@selenium_test
|
|
def test_upload_specify_ext(self):
|
|
self.perform_upload(self.get_filename("1.sam"), ext="txt")
|
|
self.history_panel_wait_for_hid_ok(1)
|
|
history_contents = self.current_history_contents()
|
|
hda = history_contents[0]
|
|
assert hda["name"] == '1.sam'
|
|
assert hda["extension"] == "txt", hda
|
|
|
|
@selenium_test
|
|
def test_upload_specify_genome(self):
|
|
self.perform_upload(self.get_filename("1.sam"), genome="hg18")
|
|
self.history_panel_wait_for_hid_ok(1)
|
|
|
|
self.history_panel_click_item_title(hid=1, wait=True)
|
|
self.assert_item_dbkey_displayed_as(1, "hg18")
|
|
|
|
@selenium_test
|
|
def test_upload_specify_ext_all(self):
|
|
self.perform_upload(self.get_filename("1.sam"), ext_all="txt")
|
|
self.history_panel_wait_for_hid_ok(1)
|
|
history_contents = self.current_history_contents()
|
|
hda = history_contents[0]
|
|
assert hda["name"] == '1.sam'
|
|
assert hda["extension"] == "txt", hda
|
|
|
|
@selenium_test
|
|
def test_upload_specify_genome_all(self):
|
|
self.perform_upload(self.get_filename("1.sam"), genome_all="hg18")
|
|
self.history_panel_wait_for_hid_ok(1)
|
|
|
|
self.history_panel_click_item_title(hid=1, wait=True)
|
|
self.assert_item_dbkey_displayed_as(1, "hg18")
|
|
|
|
@selenium_test
|
|
def test_upload_list(self):
|
|
self.upload_list([self.get_filename("1.tabular")], name="Test List")
|
|
self.history_panel_wait_for_hid_ok(2)
|
|
# Make sure modals disappeared - both List creator (TODO: upload).
|
|
self.wait_for_selector_absent_or_hidden(".collection-creator")
|
|
|
|
self.assert_item_name(2, "Test List")
|
|
|
|
# Make sure source item is hidden when the collection is created.
|
|
self.history_panel_wait_for_hid_hidden(1)
|
|
|
|
@selenium_test
|
|
def test_upload_pair(self):
|
|
self.upload_list([self.get_filename("1.tabular"), self.get_filename("2.tabular")], name="Test Pair")
|
|
self.history_panel_wait_for_hid_ok(3)
|
|
# Make sure modals disappeared - both collection creator (TODO: upload).
|
|
self.wait_for_selector_absent_or_hidden(".collection-creator")
|
|
|
|
self.assert_item_name(3, "Test Pair")
|
|
|
|
# Make sure source items are hidden when the collection is created.
|
|
self.history_panel_wait_for_hid_hidden(1)
|
|
self.history_panel_wait_for_hid_hidden(2)
|
|
|
|
@selenium_test
|
|
def test_upload_pair_specify_extension(self):
|
|
self.upload_list([self.get_filename("1.tabular"), self.get_filename("2.tabular")], name="Test Pair", ext="txt", hide_source_items=False)
|
|
self.history_panel_wait_for_hid_ok(3)
|
|
self.history_panel_wait_for_hid_ok(1)
|
|
|
|
history_contents = self.current_history_contents()
|
|
hda = history_contents[0]
|
|
assert hda["name"] == '1.tabular'
|
|
assert hda["extension"] == "txt", hda
|
|
|
|
@selenium_test
|
|
def test_upload_paired_list(self):
|
|
self.upload_paired_list([self.get_filename("1.tabular"), self.get_filename("2.tabular")], name="Test Paired List")
|
|
self.history_panel_wait_for_hid_ok(3)
|
|
# Make sure modals disappeared - both collection creator (TODO: upload).
|
|
self.wait_for_selector_absent_or_hidden(".collection-creator")
|
|
self.assert_item_name(3, "Test Paired List")
|
|
|
|
# Make sure source items are hidden when the collection is created.
|
|
self.history_panel_wait_for_hid_hidden(1)
|
|
self.history_panel_wait_for_hid_hidden(2)
|