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26 lines
899 B
Python
26 lines
899 B
Python
import os.path
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import tempfile
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import responses
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from galaxy.managers.citations import DoiCache
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from galaxy.util.bunch import Bunch
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@responses.activate
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def test_DoiCache():
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with tempfile.TemporaryDirectory() as tmp_database_dir:
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config = Bunch(
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citation_cache_type="file",
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citation_cache_data_dir=os.path.join(tmp_database_dir, "data"),
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citation_cache_lock_dir=os.path.join(tmp_database_dir, "locks"),
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citation_cache_url=None,
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citation_cache_table_name=None,
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citation_cache_schema_name=None,
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)
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doi_cache = DoiCache(config)
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dois = (("10.1093/bioinformatics/bts252", "Jörg"), ("10.1101/2021.12.24.474111", "Özkurt"))
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for doi, author in dois:
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responses.add(method="GET", url=f"https://doi.org/{doi}", body=author)
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assert author in doi_cache.get_bibtex(doi)
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