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47 lines
1.9 KiB
Python
47 lines
1.9 KiB
Python
from galaxy_test.api.test_tools import TestsTools
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from galaxy_test.base.populators import (
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DatasetCollectionPopulator,
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DatasetPopulator,
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)
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from galaxy_test.driver import integration_util
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class TestExtendedMetadataMappingIntegration(integration_util.IntegrationTestCase, TestsTools):
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"""Test mapping over tools with extended metadata enabled."""
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dataset_populator: DatasetPopulator
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framework_tool_and_types = True
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@classmethod
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def handle_galaxy_config_kwds(cls, config):
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config["metadata_strategy"] = "extended"
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config["object_store_store_by"] = "uuid"
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config["retry_metadata_internally"] = False
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def setUp(self):
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super().setUp()
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self.dataset_populator = DatasetPopulator(self.galaxy_interactor)
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self.dataset_collection_populator = DatasetCollectionPopulator(self.galaxy_interactor)
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def test_map_over_collection(self, history_id):
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hdca_id = self._build_pair(history_id, ["123", "456"])
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inputs = {
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"input1": {"batch": True, "values": [{"src": "hdca", "id": hdca_id}]},
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}
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self._run_and_check_simple_collection_mapping(history_id, inputs)
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def _run_and_check_simple_collection_mapping(self, history_id, inputs):
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create = self._run_cat(history_id, inputs=inputs, assert_ok=True)
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outputs = create["outputs"]
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jobs = create["jobs"]
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implicit_collections = create["implicit_collections"]
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assert len(jobs) == 2
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assert len(outputs) == 2
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assert len(implicit_collections) == 1
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output1 = outputs[0]
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output2 = outputs[1]
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output1_content = self.dataset_populator.get_history_dataset_content(history_id, dataset=output1)
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output2_content = self.dataset_populator.get_history_dataset_content(history_id, dataset=output2)
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assert output1_content.strip() == "123"
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assert output2_content.strip() == "456"
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