mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-08-31 01:02:04 +08:00
23 lines
958 B
Plaintext
23 lines
958 B
Plaintext
#This is a sample file distributed with Galaxy that enables tools to use
|
|
#a directory of sqlite files for use with SIFT. You will need to supply
|
|
#these files and then create a sift_db.loc file similar to this one (store
|
|
#it in this directory) that points to the directories in which those files
|
|
#are stored. The sift_db.loc file has this format (white space characters
|
|
#are TAB characters):
|
|
#
|
|
#<build> <file_path>
|
|
#
|
|
#So, for example, if your sift_db.loc began like this:
|
|
#
|
|
#hg18 /galaxy/data/hg18/misc/sift/Human_db_36
|
|
#
|
|
#then your /galaxy/data/hg18/misc/sift/Human_db_36 directory would need to
|
|
#contain the following sqlite files, among others:
|
|
#
|
|
#-rw-r--r-- 1 g2test g2data 3010870272 Sep 2 14:09 Human_CHR10.sqlite
|
|
#-rw-r--r-- 1 g2test g2data 2926365696 Sep 2 15:09 Human_CHR11.sqlite
|
|
#-rw-r--r-- 1 g2test g2data 2557210624 Sep 2 14:19 Human_CHR12.sqlite
|
|
#
|
|
#hg18 /galaxy/data/hg18/misc/sift/Human_db_36
|
|
#hg19 /galaxy/data/hg19/misc/sift/Human_db_37
|