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Dannon Baker
25 lines
1.0 KiB
Plaintext
25 lines
1.0 KiB
Plaintext
#This is a sample file distributed with Galaxy that is used by some
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#ENCODE tools. The regions.loc file has this format (white space
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#characters are TAB characters):
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#
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#<build> <uid> <region_description> <file_path>
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#
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#So, for example, if you had ENCODE Regions for build hg16 stored in
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#/depot/data2/galaxy/regions/encode_regions_coords_hg16.bed, then the
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#regions.loc entry would look like this:
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#
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#hg16 encode_hg16 ENCODE Regions /depot/data2/galaxy/regions/encode_regions_coords_hg16.bed
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#
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#and your /depot/data2/galaxy/regions/ directory would
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#contain all of your regions files (e.g.):
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#
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#-rw-r--r-- 1 dan g2cache 1367 2006-03-14 13:55 encode_regions_coords_hg16.bed
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#-rw-r--r-- 1 dan g2cache 1367 2006-03-14 13:53 encode_regions_coords_hg17.bed
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#...etc...
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#
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#Your regions.loc file should include an entry per line for each region
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#file you have stored. For example:
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#
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#hg16 encode_hg16 ENCODE Regions /depot/data2/galaxy/regions/encode_regions_coords_hg16.bed
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#hg17 encode_hg17 ENCODE Regions /depot/data2/galaxy/regions/encode_regions_coords_hg17.bed
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