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31 lines
1.3 KiB
XML
31 lines
1.3 KiB
XML
<tool id="metadata_biom1" name="metadata_BIOM1" version="1.0.0">
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<command><![CDATA[
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cp '${input_metadata_values}' '${output_of_input_metadata}'
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]]></command>
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<configfiles>
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<configfile name="input_metadata_values">table_rows: ${input_biom1.metadata.table_rows}
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table_matrix_element_type: ${input_biom1.metadata.table_matrix_element_type}
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table_format: ${input_biom1.metadata.table_format}
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table_generated_by: ${input_biom1.metadata.table_generated_by}
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table_matrix_type: ${input_biom1.metadata.table_matrix_type}
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table_shape: ${input_biom1.metadata.table_shape}
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table_format_url: ${input_biom1.metadata.table_format_url}
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table_date: ${input_biom1.metadata.table_date}
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table_type: ${input_biom1.metadata.table_type}
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table_id: ${input_biom1.metadata.table_id}
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table_columns: ${input_biom1.metadata.table_columns}</configfile>
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</configfiles>
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<inputs>
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<param name="input_biom1" type="data" format="biom1" label="BIOM1 File"/>
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</inputs>
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<outputs>
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<data name="output_of_input_metadata" format="txt" />
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</outputs>
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<tests>
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<test>
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<param name="input_biom1" value="input_taxonomy.biom1" ftype="biom1" />
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<output name="output_of_input_metadata" ftype="txt" file="biom1_metadata_test.txt" lines_diff="4"/>
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</test>
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</tests>
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</tool>
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