John Chilton 06ca789f92 Configuration tests for the last few upload enhancements.

2017-08-12 07:13:05 -04:00

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library

Fix library security functional tests.

2014-04-25 15:29:56 -04:00

users

Fix certain failing functional tests.

2014-04-16 16:13:11 -04:00

1.axt

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1.bam

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1.bed

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1.bed.spaces

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1.bedgraph

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1.bigbed

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1.bigwig

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1.customtrack

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1.fasta

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1.fastq

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1.fastqsanger

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1.fastqsanger.bz2

add fastq(*).bz2 datatypes and converters

2016-11-24 15:37:51 +01:00

1.fastqsanger.gz

Create a BaseFastq class and add test tools

2016-11-11 16:13:18 +01:00

1.fastqsolexa

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1.interval

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1.lav

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1.pileup

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1.RData

Add missing file from previous commit.

2015-09-23 15:10:06 +01:00

1.sam

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1.sam.gz

Configuration tests for the last few upload enhancements.

2017-08-12 07:13:05 -04:00

1.scf

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1.sff

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1.tabular

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1.txt

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1.wig

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2.bed

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2.fasta

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2.tabular

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2gen.fastq

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3.bam

More fixes to 3.bam to make it valid stripped out secondary HD header and duplicated sequences chr10-16

2016-02-02 13:54:24 -05:00

3.bed

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3.maf

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3unsorted.bam

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4.bed

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4.bed.bz2

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4.bed.gz

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4.bed.zip

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5_Ig-like.gff

Cope with GFF3 as well as legacy GFF.

2017-06-26 11:16:06 +01:00

5.bed

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5.gff

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5.gff3

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6.bed

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7.bed

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8.bed

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9.bed

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454Score.pdf

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454Score.png

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a.tab

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a.txt

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asian_chars_1.txt

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bad.html.gz

Configuration tests for the last few upload enhancements.

2017-08-12 07:13:05 -04:00

bam_from_sam.bam

Add sam-to-bam conversion test tool

2016-11-16 22:01:47 +01:00

bcf_index_metadata_test.bcf

Added test for bcf index creation.

2015-04-28 13:45:33 -04:00

bcf_index_metadata_test.txt

Added test for bcf index creation.

2015-04-28 13:45:33 -04:00

biom1_metadata_test.txt

Add test for failing handling of BIOM1 metadata.

2016-06-07 12:02:09 -04:00

cat_wrapper_out1.bed

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composite_output_expected_log

Improve composite output tool test.

2016-05-16 11:51:03 -04:00

filter1_in3.sam

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filter1_in5.tab

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filter1_inbad.bed

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filter1_test1.bed

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filter1_test2.bed

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filter1_test3.sam

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filter1_test4.bed

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filter1_test5.tab

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filter_labels_1.txt

Implement collection operation for filtering lists from a file.

2017-04-17 17:08:25 -04:00

GRCm38mm10_chr5_34761740-34912521.fa

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

html_file.txt

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input_taxonomy.biom1

Add test for failing handling of BIOM1 metadata.

2016-06-07 12:02:09 -04:00

neostore.zip

reduced the size of the neostore zip file

2016-07-25 11:43:34 +02:00

new_labels_1.txt

Start work on a relabelling collection operation.

2017-04-13 23:11:49 -04:00

new_labels_2.txt

Add possibility to rename collection items from a tabular file

2017-04-13 23:11:49 -04:00

new_labels_bad_1.txt

Various improvements to relabel from file collection operation.

2017-04-13 23:15:56 -04:00

new_labels_bad_2.txt

Fix relabel_from_file collection operation error handling if duplicate identifiers.

2017-04-17 13:12:57 -04:00

phiX.fasta

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qualscores.qual454

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qualscores.qualsolid

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random-file

Configuration tests for the last few upload enhancements.

2017-08-12 07:13:05 -04:00

rgenetics.bed

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rgenetics.bim

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rgenetics.fam

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rgenetics.map

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rgenetics.ped

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sam_with_header.sam

Add sam-to-bam conversion test tool

2016-11-16 22:01:47 +01:00

shrimp_cs_test1.csfasta

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simple_line_alternative.txt

Rework test framework testing and tools.

2014-04-28 11:48:51 -05:00

simple_line_x2.txt

Rework test framework testing and tools.

2014-04-28 11:48:51 -05:00

simple_line_x3.txt

Rework test framework testing and tools.

2014-04-28 11:48:51 -05:00

simple_line_x5.txt

Rework test framework testing and tools.

2014-04-28 11:48:51 -05:00

simple_line.txt

Rework test framework testing and tools.

2014-04-28 11:48:51 -05:00

simple_lines_both.txt

Add framework test tool that has both data and data_collection param - with test case.

2014-05-07 15:39:03 -05:00

simple_lines_interleaved.txt

Rework test framework testing and tools.

2014-04-28 11:48:51 -05:00

simple.xml

added functional test for <is_valid_xml>

2017-02-01 21:17:07 -06:00

test.vcf.gz

Added test file

2017-07-07 18:29:05 +03:00

tinywga.bed

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tinywga.bim

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tinywga.fam

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tinywga.map

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tinywga.ped

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tinywga.ped.space_to_tab

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