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For a multiple select, checkboxes must be used. When not allowing multiple values, radiobuttons must be used. Options returned from user selections can either be exact, or recursive (the selection of an upper option will result in the passing of all lower options to the command line). Options can be filtered based upon a metadata key of an input dataset. Options can also be loaded from a configuration file that exists outside of the tool's xml file. If javascript is enabled, option hierarchies are expandable and collapsable. The annotation profiler has been updated to use this parameter type for table selection. See this tool as an example of use.
1102 lines
73 KiB
Plaintext
1102 lines
73 KiB
Plaintext
<filter type="meta_key" name="dbkey" value="hg18">
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<options>
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<option name="Mapping and Sequencing Tracks" value="group-map">
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<option name="STS Markers" value="stsMap"/>
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<option name="Fosmid End Pairs" value="fosEndPairs"/>
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<option name="Chromosome Band" value="cytoBand"/>
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<option name="BAC End Pairs" value="bacEndPairs"/>
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<option name="FISH Clones" value="fishClones"/>
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<option name="GC Percent" value="gc5Base"/>
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<option name="Coverage" value="clonePos"/>
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<option name="Recomb Rate" value="recombRate"/>
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<option name="Map Contigs" value="ctgPos"/>
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<option name="Assembly" value="gold"/>
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<option name="Gap" value="gap"/>
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<option name="Chromosome Band (Ideogram)" value="cytoBandIdeo"/>
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</option>
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<option name="Comparative Genomics" value="group-compGeno">
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<option name="chainRn4" value="chainRn4"/>
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<option name="chainOryLat1" value="chainOryLat1"/>
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<option name="chainTetNig1" value="chainTetNig1"/>
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<option name="netDanRer5" value="netDanRer5"/>
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<option name="netPanTro2" value="netPanTro2"/>
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<option name="chainCanFam2" value="chainCanFam2"/>
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<option name="netPonAbe2" value="netPonAbe2"/>
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<option name="netGasAcu1" value="netGasAcu1"/>
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<option name="netStrPur2" value="netStrPur2"/>
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<option name="chainDanRer5" value="chainDanRer5"/>
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<option name="netGalGal3" value="netGalGal3"/>
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<option name="netMonDom4" value="netMonDom4"/>
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<option name="netOryLat1" value="netOryLat1"/>
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<option name="netMm9" value="netMm9"/>
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<option name="chainRheMac2" value="chainRheMac2"/>
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<option name="netOrnAna1" value="netOrnAna1"/>
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<option name="chainFr2" value="chainFr2"/>
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<option name="netXenTro2" value="netXenTro2"/>
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<option name="Cons Indels MmCf" value="consIndelsHgMmCanFam"/>
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<option name="Tetraodon Ecores" value="ecoresTetNig1"/>
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<option name="netTetNig1" value="netTetNig1"/>
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<option name="chainGalGal3" value="chainGalGal3"/>
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<option name="chainStrPur2" value="chainStrPur2"/>
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<option name="chainOrnAna1" value="chainOrnAna1"/>
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<option name="netFelCat3" value="netFelCat3"/>
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<option name="chainEquCab1" value="chainEquCab1"/>
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<option name="chainPonAbe2" value="chainPonAbe2"/>
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<option name="chainFelCat3" value="chainFelCat3"/>
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<option name="mostConserved28way" value="subtracks-mostConserved28way">
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<option name="Most Conserved" value="mostConserved28way"/>
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<option name="Vertebrate" value="phastConsElements28way"/>
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<option name="Mammal" value="phastConsElements28wayPlacMammal"/>
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</option>
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<option name="chainAnoCar1" value="chainAnoCar1"/>
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<option name="17-Way Cons" value="multiz17way"/>
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<option name="chainXenTro2" value="chainXenTro2"/>
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<option name="17-Way Most Cons" value="phastConsElements17way"/>
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<option name="chainGasAcu1" value="chainGasAcu1"/>
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<option name="Conservation" value="multiz28way"/>
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<option name="chainCalJac1" value="chainCalJac1"/>
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<option name="netCanFam2" value="netCanFam2"/>
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<option name="chainMm9" value="chainMm9"/>
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<option name="chainMonDom4" value="chainMonDom4"/>
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<option name="netCalJac1" value="netCalJac1"/>
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<option name="netRheMac2" value="netRheMac2"/>
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<option name="chainPanTro2" value="chainPanTro2"/>
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<option name="netEquCab1" value="netEquCab1"/>
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<option name="netFr2" value="netFr2"/>
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<option name="netAnoCar1" value="netAnoCar1"/>
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<option name="netBosTau4" value="netBosTau4"/>
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<option name="chainBosTau4" value="chainBosTau4"/>
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<option name="netRn4" value="netRn4"/>
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</option>
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<option name="Phenotype and Disease Associations" value="group-phenDis">
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<option name="caseControl" value="subtracks-caseControl">
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<option name="Case Control" value="caseControl"/>
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<option name="CCC Bipolar Dis" value="cccTrendPvalBd"/>
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<option name="CCC Coronary Art" value="cccTrendPvalCad"/>
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<option name="CCC Crohns Dis" value="cccTrendPvalCd"/>
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<option name="CCC Hypertension" value="cccTrendPvalHt"/>
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<option name="CCC Rheum Arth" value="cccTrendPvalRa"/>
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<option name="CCC T1 Diabetes" value="cccTrendPvalT1d"/>
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<option name="CCC T2 Diabetes" value="cccTrendPvalT2d"/>
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</option>
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<option name="GAD View" value="gad"/>
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<option name="RGD Human QTL" value="rgdQtl"/>
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<option name="RGD Rat QTL" value="rgdRatQtl"/>
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<option name="nimhBipolar" value="subtracks-nimhBipolar">
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<option name="NIMH Bipolar" value="nimhBipolar"/>
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<option name="NIMH Bipolar De" value="nimhBipolarDe"/>
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<option name="NIMH Bipolar Us" value="nimhBipolarUs"/>
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</option>
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<option name="jaxQtlMapped" value="subtracks-jaxQtlMapped">
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<option name="MGI Mouse QTL" value="jaxQtlAsIs"/>
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<option name="MGI Mouse QTL" value="jaxQtlMapped"/>
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<option name="MGI Mouse QTL Padded" value="jaxQtlPadded"/>
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</option>
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</option>
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<option name="mRNA and EST Tracks" value="group-rna">
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<option name="CGAP SAGE" value="cgapSage"/>
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<option name="est" value="est"/>
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<option name="UniGene" value="uniGene_3"/>
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<option name="Gene Bounds" value="rnaCluster"/>
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<option name="SIB Alt-Splicing" value="sibTxGraph"/>
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<option name="Spliced ESTs" value="intronEst"/>
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<option name="Other mRNAs" value="xenoMrna"/>
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<option name="H-Inv" value="HInvGeneMrna"/>
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<option name="mrna" value="mrna"/>
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<option name="polyA" value="subtracks-polyA">
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<option name="Poly(A)" value="polyA"/>
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<option name="PolyA_DB" value="polyaDb"/>
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<option name="Poly(A) SVM" value="polyaPredict"/>
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</option>
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<option name="Other ESTs" value="xenoEst"/>
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</option>
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<option name="Genes and Gene Prediction Tracks" value="group-genes">
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<option name="CCDS" value="ccdsGene"/>
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<option name="augustus" value="subtracks-augustus">
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<option name="Augustus" value="augustus"/>
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<option name="Augustus Ab Initio" value="augustusAbinitio"/>
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<option name="Augustus Hints" value="augustusHints"/>
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<option name="Augustus De Novo" value="augustusXRA"/>
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</option>
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<option name="sno/miRNA" value="wgRna"/>
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<option name="Geneid Genes" value="geneid"/>
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<option name="SIB Genes" value="sibGene"/>
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<option name="Old Known Genes" value="knownGeneOld2"/>
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<option name="EvoFold" value="evofold"/>
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<option name="CONTRAST" value="contrastGene"/>
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<option name="Exoniphy" value="exoniphy"/>
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<option name="AceView Genes" value="acembly"/>
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<option name="nscan" value="subtracks-nscan">
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<option name="N-SCAN" value="nscan"/>
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<option name="N-SCAN" value="nscanGene"/>
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<option name="N-SCAN PASA-EST" value="nscanPasaGene"/>
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</option>
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<option name="Ensembl Genes" value="ensGene"/>
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<option name="SGP Genes" value="sgpGene"/>
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<option name="RefSeq Genes" value="refGene"/>
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<option name="Genscan Genes" value="genscan"/>
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<option name="RNA Genes" value="rnaGene"/>
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<option name="UCSC Genes" value="knownGene"/>
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<option name="ACEScan" value="acescan"/>
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<option name="Other RefSeq" value="xenoRefGene"/>
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<option name="Alt Events" value="knownAlt"/>
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<option name="ORFeome Clones" value="orfeomeGenes"/>
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<option name="MGC Genes" value="mgcGenes"/>
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</option>
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<option name="Variation and Repeats" value="group-varRep">
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<option name="Segmental Dups" value="genomicSuperDups"/>
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<option name="Structural Var" value="cnp"/>
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<option name="tajdSnp" value="subtracks-tajdSnp">
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<option name="Tajima's D SNPs" value="tajdSnp"/>
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<option name="SNPs AD" value="tajdSnpAd"/>
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<option name="SNPs ED" value="tajdSnpEd"/>
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<option name="SNPs XD" value="tajdSnpXd"/>
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</option>
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<option name="Self Chain" value="chainSelf"/>
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<option name="RepeatMasker" value="rmsk"/>
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<option name="snpArray" value="subtracks-snpArray">
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<option name="SNP Arrays" value="snpArray"/>
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<option name="Affy 250KNsp" value="snpArrayAffy250Nsp"/>
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<option name="Affy 250KSty" value="snpArrayAffy250Sty"/>
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<option name="Affy SNP 5.0" value="snpArrayAffy5"/>
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<option name="Affy SNP 6.0" value="snpArrayAffy6"/>
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<option name="Affy SNP 6.0 SV" value="snpArrayAffy6SV"/>
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<option name="Illumina 300" value="snpArrayIllumina300"/>
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<option name="Illumina 550" value="snpArrayIllumina550"/>
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<option name="Illumina 650" value="snpArrayIllumina650"/>
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</option>
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<option name="hapmapLdPh" value="subtracks-hapmapLdPh">
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<option name="HapMap LD Phased" value="hapmapLdPh"/>
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<option name="Phased CEU" value="hapmapLdPhCeu"/>
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<option name="Ph JPT+CHB" value="hapmapLdPhChbJpt"/>
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<option name="Phased YRI" value="hapmapLdPhYri"/>
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</option>
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<option name="SNPs (126)" value="snp126"/>
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<option name="Interrupted Rpts" value="nestedRepeats"/>
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<option name="Exapted Repeats" value="exaptedRepeats"/>
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<option name="SNPs (128)" value="snp128"/>
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<option name="tajD" value="subtracks-tajD">
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<option name="Tajima's D" value="tajD"/>
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<option name="Tajima's D AD" value="tajdAd"/>
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<option name="Tajima's D ED" value="tajdEd"/>
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<option name="Tajima's D XD" value="tajdXd"/>
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</option>
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<option name="Microsatellite" value="microsat"/>
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<option name="Simple Repeats" value="simpleRepeat"/>
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<option name="hapmapSnps" value="subtracks-hapmapSnps">
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<option name="Chimp Alleles" value="hapmapAllelesChimp"/>
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<option name="Macaque Alleles" value="hapmapAllelesMacaque"/>
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<option name="HapMap SNPs" value="hapmapSnps"/>
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<option name="SNPs CEU" value="hapmapSnpsCEU"/>
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<option name="SNPs CHB" value="hapmapSnpsCHB"/>
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<option name="SNPs JPT" value="hapmapSnpsJPT"/>
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<option name="SNPs YRI" value="hapmapSnpsYRI"/>
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</option>
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</option>
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<option name="Expression and Regulation" value="group-regulation">
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<option name="FirstEF" value="firstEF"/>
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<option name="Affy GNF1H" value="affyGnf1h"/>
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<option name="Affy All Exon" value="affyHumanExon"/>
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<option name="wgEncodeUcsdNgTaf1Sites" value="subtracks-wgEncodeUcsdNgTaf1Sites">
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<option name="TAF1 Known Sites" value="wgEncodeUcsdNgTaf1KnownSites"/>
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<option name="TAF1 Novel Sites" value="wgEncodeUcsdNgTaf1NovelSites"/>
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<option name="LI TAF1 Sites" value="wgEncodeUcsdNgTaf1Sites"/>
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</option>
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<option name="wgEncodeUcsdNgTaf1Valid" value="subtracks-wgEncodeUcsdNgTaf1Valid">
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<option name="LI TAF1 Valid" value="wgEncodeUcsdNgTaf1Valid"/>
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<option name="LI Valid H3K4m2" value="wgEncodeUcsdNgTaf1ValidH3K4me"/>
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<option name="LI Valid H3ac" value="wgEncodeUcsdNgTaf1ValidH3ac"/>
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<option name="LI Valid Pol2" value="wgEncodeUcsdNgTaf1ValidRnap"/>
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<option name="LI Valid TAF1" value="wgEncodeUcsdNgTaf1ValidTaf"/>
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</option>
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<option name="LI TAF1 Signal" value="wgEncodeUcsdNgTaf1Signal"/>
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<option name="Affy Txn" value="affyTxnPhase3Super"/>
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<option name="affyTxnPhase3L" value="subtracks-affyTxnPhase3L">
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<option name="HDF lRNA" value="affyTxnPhase3HDF"/>
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<option name="HeLa Cyto lRNA" value="affyTxnPhase3HeLaCyto"/>
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<option name="HeLa Nucl lRNA" value="affyTxnPhase3HeLaNuclear"/>
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<option name="HepG2 Cyto lRNA" value="affyTxnPhase3HepG2Cyto"/>
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<option name="HepG2 Nucl lRNA" value="affyTxnPhase3HepG2Nuclear"/>
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<option name="Jurkat lRNA" value="affyTxnPhase3Jurkat"/>
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<option name="Affy Tx lRNA Sig" value="affyTxnPhase3L"/>
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<option name="NCCIT lRNA" value="affyTxnPhase3NCCIT"/>
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<option name="PC3 lRNA" value="affyTxnPhase3PC3"/>
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<option name="SK-N-AS lRNA" value="affyTxnPhase3SK_N_AS"/>
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<option name="U87MG lRNA" value="affyTxnPhase3U87MG"/>
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</option>
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<option name="SwitchGear TSS" value="switchDbTss"/>
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<option name="LI/UCSD TAF1" value="wgEncodeUcsdNgTaf1Super"/>
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<option name="Affy U133Plus2" value="affyU133Plus2"/>
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<option name="GNF Ratio" value="affyRatio"/>
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<option name="Affy HuEx 1.0" value="affyHuEx1"/>
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<option name="affyTxnPhase3FragsS" value="subtracks-affyTxnPhase3FragsS">
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<option name="HeLa - sRNA" value="affyTxnPhase3FragsHeLaBottomStrand"/>
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<option name="HeLa + sRNA" value="affyTxnPhase3FragsHeLaTopStrand"/>
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<option name="HepG2 - sRNA" value="affyTxnPhase3FragsHepG2BottomStrand"/>
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<option name="HepG2 + sRNA" value="affyTxnPhase3FragsHepG2TopStrand"/>
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<option name="Affy Tx sRNA Reg" value="affyTxnPhase3FragsS"/>
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</option>
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<option name="7X Reg Potential" value="regPotential7X"/>
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<option name="uppsalaChipSites" value="subtracks-uppsalaChipSites">
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<option name="UU H3ac Sites" value="uppsalaChipH3acSites"/>
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<option name="UU ChIP Sites" value="uppsalaChipSites"/>
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<option name="UU Usf1 Sites" value="uppsalaChipUsf1Sites"/>
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<option name="UU Usf2 Sites" value="uppsalaChipUsf2Sites"/>
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</option>
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<option name="CpG Islands" value="cpgIslandExt"/>
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<option name="GIS PET" value="wgEncodeGisSuper"/>
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<option name="GNF Atlas 2" value="gnfAtlas2"/>
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<option name="Vista Enhancers" value="vistaEnhancers"/>
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<option name="affyTxnPhase3S" value="subtracks-affyTxnPhase3S">
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<option name="HeLa - sRNA" value="affyTxnPhase3HeLaBottomStrand"/>
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<option name="HeLa + sRNA" value="affyTxnPhase3HeLaTopStrand"/>
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<option name="HepG2 - sRNA" value="affyTxnPhase3HepG2BottomStrand"/>
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<option name="HepG2 + sRNA" value="affyTxnPhase3HepG2TopStrand"/>
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<option name="Affy Tx sRNA Sig" value="affyTxnPhase3S"/>
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</option>
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<option name="wgEncodeGisRnaPet" value="subtracks-wgEncodeGisRnaPet">
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<option name="GIS PET RNA" value="wgEncodeGisRnaPet"/>
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<option name="GIS RNA HCT116" value="wgEncodeGisRnaPetHCT116"/>
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<option name="GIS RNA hES3" value="wgEncodeGisRnaPetHes3"/>
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<option name="GIS RNA MCF7" value="wgEncodeGisRnaPetMCF7"/>
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<option name="GIS RNA MCF7 Est" value="wgEncodeGisRnaPetMCF7Estr"/>
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</option>
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<option name="TFBS Conserved" value="tfbsConsSites"/>
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<option name="affyTxnPhase3FragsL" value="subtracks-affyTxnPhase3FragsL">
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<option name="HDF lRNA" value="affyTxnPhase3FragsHDF"/>
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<option name="HeLa Cyto lRNA" value="affyTxnPhase3FragsHeLaCyto"/>
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<option name="HeLa Nucl lRNA" value="affyTxnPhase3FragsHeLaNuclear"/>
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<option name="HepG2 Cyto lRNA" value="affyTxnPhase3FragsHepG2Cyto"/>
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<option name="HepG2 Nucl lRNA" value="affyTxnPhase3FragsHepG2Nuclear"/>
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<option name="Jurkat lRNA" value="affyTxnPhase3FragsJurkat"/>
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<option name="Affy Tx lRNA Reg" value="affyTxnPhase3FragsL"/>
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<option name="NCCIT lRNA" value="affyTxnPhase3FragsNCCIT"/>
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<option name="PC3 lRNA" value="affyTxnPhase3FragsPC3"/>
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<option name="SK-N-AS lRNA" value="affyTxnPhase3FragsSK_N_AS"/>
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<option name="U87MG lRNA" value="affyTxnPhase3FragsU87MG"/>
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</option>
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<option name="ORegAnno" value="oreganno"/>
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<option name="Affy U133" value="affyU133"/>
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<option name="Eponine TSS" value="eponine"/>
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<option name="Allen Brain" value="allenBrainAli"/>
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<option name="TS miRNA sites" value="targetScanS"/>
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<option name="Bertone Yale TAR" value="yaleBertoneTars"/>
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<option name="uppsalaChipSignal" value="subtracks-uppsalaChipSignal">
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<option name="UU H3ac Signal" value="uppsalaChipH3acSignal"/>
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<option name="UU ChIP Signal" value="uppsalaChipSignal"/>
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<option name="UU Usf1 Signal" value="uppsalaChipUsf1Signal"/>
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<option name="UU Usf2 Signal" value="uppsalaChipUsf2Signal"/>
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</option>
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<option name="Affy U95" value="affyU95"/>
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<option name="Uppsala ChIP" value="uppsalaChipSuper"/>
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<option name="wgEncodeGisChipPetAll" value="subtracks-wgEncodeGisChipPetAll">
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<option name="p53 HCT116 +5FU" value="wgEncodeGisChipPet"/>
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<option name="GIS ChIP-PET" value="wgEncodeGisChipPetAll"/>
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<option name="H3K27me3 hES3" value="wgEncodeGisChipPetHes3H3K27me3"/>
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<option name="H3K4me3 hES3" value="wgEncodeGisChipPetHes3H3K4me3"/>
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<option name="cMyc P493" value="wgEncodeGisChipPetMycP493"/>
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<option name="STAT1 HeLa +gIF" value="wgEncodeGisChipPetStat1Gif"/>
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<option name="STAT1 HeLa -gIF" value="wgEncodeGisChipPetStat1NoGif"/>
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</option>
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</option>
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<option name="ENCODE Comparative Genomics and Variation" value="group-encodeCompAndVar">
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<option name="NHGRI DIPs" value="encodeIndels"/>
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</option>
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<option name="Experimental Tracks" value="group-x">
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<option name="Uppsala ChIP" value="encodeUppsalaChip"/>
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<option name="cnp" value="subtracks-cnp">
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<option name="Iafrate CNPs" value="cnpIafrate2"/>
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<option name="Locke CNPs" value="cnpLocke"/>
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<option name="Redon CNPs" value="cnpRedon"/>
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<option name="Sebat CNPs" value="cnpSebat2"/>
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<option name="Sharp CNPs" value="cnpSharp2"/>
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<option name="Tuzun Fosmids" value="cnpTuzun"/>
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<option name="Conrad Dels" value="delConrad2"/>
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<option name="Hinds Dels" value="delHinds2"/>
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<option name="McCarroll Dels" value="delMccarroll"/>
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</option>
|
|
<option name="encodeUncFaire" value="subtracks-encodeUncFaire">
|
|
<option name="FAIRE PeakFinder" value="encodeUncFairePeaks"/>
|
|
<option name="FAIRE ChIPOTle" value="encodeUncFairePeaksChipotle"/>
|
|
</option>
|
|
<option name="encodeUppsalaChipBut" value="subtracks-encodeUppsalaChipBut">
|
|
<option name="UU H3ac 0h vs 12h" value="encodeUppsalaChipH3acBut0vs12"/>
|
|
<option name="UU H4ac 0h vs 12h" value="encodeUppsalaChipH4acBut0vs12"/>
|
|
</option>
|
|
<option name="UT-Austin STAGE" value="encodeUtexStage"/>
|
|
<option name="UW DNase-array" value="encodeRegulomeDnaseArray"/>
|
|
<option name="encodeSangerChipHits" value="subtracks-encodeSangerChipHits">
|
|
<option name="SI H3K4m1 GM6990" value="encodeSangerChipCenterH3K4me1GM06990"/>
|
|
<option name="SI H3K4me1 HeLa" value="encodeSangerChipCenterH3K4me1HeLa"/>
|
|
<option name="SI H3K4m2 GM6990" value="encodeSangerChipCenterH3K4me2GM06990"/>
|
|
<option name="SI H3K4me2 HeLa" value="encodeSangerChipCenterH3K4me2HeLa"/>
|
|
<option name="SI H3K4me2 K562" value="encodeSangerChipCenterH3K4me2K562"/>
|
|
<option name="SI H3K4m3 GM6990" value="encodeSangerChipCenterH3K4me3GM06990"/>
|
|
<option name="SI H3K4me3 HeLa" value="encodeSangerChipCenterH3K4me3HeLa"/>
|
|
<option name="SI H3K4me3 K562" value="encodeSangerChipCenterH3K4me3K562"/>
|
|
<option name="SI H3ac GM06990" value="encodeSangerChipCenterH3acGM06990"/>
|
|
<option name="SI H3ac HeLa" value="encodeSangerChipCenterH3acHeLa"/>
|
|
<option name="SI H3ac K562" value="encodeSangerChipCenterH3acK562"/>
|
|
<option name="SI H4ac GM06990" value="encodeSangerChipCenterH4acGM06990"/>
|
|
<option name="SI H4ac HeLa" value="encodeSangerChipCenterH4acHeLa"/>
|
|
<option name="SI H4ac K562" value="encodeSangerChipCenterH4acK562"/>
|
|
</option>
|
|
<option name="Gencode Genes Mar07" value="encodeGencodeGeneMar07"/>
|
|
<option name="encodeNhgriDukeDnaseHs off" value="subtracks-encodeNhgriDukeDnaseHs off">
|
|
<option name="DNase CD4 MS" value="encodeNhgriDnaseHsMpssCd4"/>
|
|
<option name="DNase CD4-act MS" value="encodeNhgriDnaseHsMpssCd4Act"/>
|
|
</option>
|
|
<option name="encodeNhgriDukeDnaseHs" value="subtracks-encodeNhgriDukeDnaseHs">
|
|
<option name="DNase CD4 Pval" value="encodeNhgriDnaseHsChipPvalCd4"/>
|
|
<option name="DNase GM069 Pval" value="encodeNhgriDnaseHsChipPvalGm06990"/>
|
|
<option name="DNase H9 Pval" value="encodeNhgriDnaseHsChipPvalH9"/>
|
|
<option name="DNase HeLa Pval" value="encodeNhgriDnaseHsChipPvalHela"/>
|
|
<option name="DNase HepG2 Pval" value="encodeNhgriDnaseHsChipPvalHepG2"/>
|
|
<option name="DNase IMR90 Pval" value="encodeNhgriDnaseHsChipPvalImr90"/>
|
|
<option name="DNase K562 Pval" value="encodeNhgriDnaseHsChipPvalK562"/>
|
|
</option>
|
|
</option>
|
|
<option name="ENCODE Transcript Levels" value="group-encodeTxLevels">
|
|
<option name="encodeYaleAffyRNATars" value="subtracks-encodeYaleAffyRNATars">
|
|
<option name="Yale TAR NB4 RA" value="encodeYaleAffyNB4RARNATars"/>
|
|
<option name="Yale TAR NB4 TPA" value="encodeYaleAffyNB4TPARNATars"/>
|
|
<option name="Yale TAR NB4 Un" value="encodeYaleAffyNB4UntrRNATars"/>
|
|
<option name="Yale TAR Neutro" value="encodeYaleAffyNeutRNATars"/>
|
|
<option name="Yale TAR Plcnta" value="encodeYaleAffyPlacRNATars"/>
|
|
<option name="Yale TAR" value="encodeYaleAffyRNATars"/>
|
|
</option>
|
|
<option name="encodeYaleAffyRNATransMap" value="subtracks-encodeYaleAffyRNATransMap">
|
|
<option name="Yale RNA NB4 RA" value="encodeYaleAffyNB4RARNATransMap"/>
|
|
<option name="Yale RNA NB4 TPA" value="encodeYaleAffyNB4TPARNATransMap"/>
|
|
<option name="Yale RNA NB4 Un" value="encodeYaleAffyNB4UntrRNATransMap"/>
|
|
<option name="Yale RNA Neutro" value="encodeYaleAffyNeutRNATransMap"/>
|
|
<option name="Yale RNA Plcnta" value="encodeYaleAffyPlacRNATransMap"/>
|
|
<option name="Yale RNA" value="encodeYaleAffyRNATransMap"/>
|
|
</option>
|
|
<option name="encodeAffyRnaSignal" value="subtracks-encodeAffyRnaSignal">
|
|
<option name="Affy RNA GM06990" value="encodeAffyRnaGm06990Signal"/>
|
|
<option name="Affy RNA HeLa" value="encodeAffyRnaHeLaSignal"/>
|
|
<option name="Affy RNA RA 0h" value="encodeAffyRnaHl60SignalHr00"/>
|
|
<option name="Affy RNA RA 2h" value="encodeAffyRnaHl60SignalHr02"/>
|
|
<option name="Affy RNA RA 8h" value="encodeAffyRnaHl60SignalHr08"/>
|
|
<option name="Affy RNA RA 32h" value="encodeAffyRnaHl60SignalHr32"/>
|
|
<option name="Affy RNA Signal" value="encodeAffyRnaSignal"/>
|
|
</option>
|
|
<option name="encodeYaleMASPlacRNATransMap" value="subtracks-encodeYaleMASPlacRNATransMap">
|
|
<option name="Yale NB4 NgF RNA" value="encodeYaleMASNB4RNANprotTMFWDMless36mer36bp"/>
|
|
<option name="Yale NB4 NgR RNA" value="encodeYaleMASNB4RNANprotTMREVMless36mer36bp"/>
|
|
<option name="Yale Plc NgF RNA" value="encodeYaleMASPlacRNANprotTMFWDMless36mer36bp"/>
|
|
<option name="Yale Plc NgR RNA" value="encodeYaleMASPlacRNANprotTMREVMless36mer36bp"/>
|
|
<option name="Yale MAS RNA" value="encodeYaleMASPlacRNATransMap"/>
|
|
<option name="Yale Plc BtF RNA" value="encodeYaleMASPlacRNATransMapFwdMless36mer36bp"/>
|
|
<option name="Yale Plc BtR RNA" value="encodeYaleMASPlacRNATransMapRevMless36mer36bp"/>
|
|
</option>
|
|
<option name="encodeBuFirstExon" value="subtracks-encodeBuFirstExon">
|
|
<option name="BU First Exon" value="encodeBuFirstExon"/>
|
|
<option name="BU Cere. Cortex" value="encodeBuFirstExonCerebrum"/>
|
|
<option name="BU Colon" value="encodeBuFirstExonColon"/>
|
|
<option name="BU Heart" value="encodeBuFirstExonHeart"/>
|
|
<option name="BU Kidney" value="encodeBuFirstExonKidney"/>
|
|
<option name="BU Liver" value="encodeBuFirstExonLiver"/>
|
|
<option name="BU Lung" value="encodeBuFirstExonLung"/>
|
|
<option name="BU Skel. Muscle" value="encodeBuFirstExonSkMuscle"/>
|
|
<option name="BU Spleen" value="encodeBuFirstExonSpleen"/>
|
|
<option name="BU Stomach" value="encodeBuFirstExonStomach"/>
|
|
<option name="BU Testis" value="encodeBuFirstExonTestis"/>
|
|
</option>
|
|
<option name="encodeAffyEcSites" value="subtracks-encodeAffyEcSites">
|
|
<option name="EC1 Sites BrainC" value="encodeAffyEc1BrainCerebellumSites"/>
|
|
<option name="EC1 Sites BrainF" value="encodeAffyEc1BrainFrontalLobeSites"/>
|
|
<option name="EC1 Sites Hippoc" value="encodeAffyEc1BrainHippocampusSites"/>
|
|
<option name="EC1 Sites BrainH" value="encodeAffyEc1BrainHypothalamusSites"/>
|
|
<option name="EC1 Sites FetalK" value="encodeAffyEc1FetalKidneySites"/>
|
|
<option name="EC1 Sites Spleen" value="encodeAffyEc1FetalSpleenSites"/>
|
|
<option name="EC1 Sites FetalT" value="encodeAffyEc1FetalTestisSites"/>
|
|
<option name="EC1 Sites GM0699" value="encodeAffyEc1GM06990Sites"/>
|
|
<option name="EC1 Sites HeLa" value="encodeAffyEc1HeLaC1S3Sites"/>
|
|
<option name="EC1 Sites HepG2" value="encodeAffyEc1HepG2Sites"/>
|
|
<option name="EC1 Sites K562" value="encodeAffyEc1K562Sites"/>
|
|
<option name="EC1 Sites Ovary" value="encodeAffyEc1OvarySites"/>
|
|
<option name="EC1 Sites Placen" value="encodeAffyEc1PlacentaSites"/>
|
|
<option name="EC1 Sites Prost" value="encodeAffyEc1ProstateSites"/>
|
|
<option name="EC1 Sites TertBJ" value="encodeAffyEc1TertBJSites"/>
|
|
<option name="EC1 Sites Testis" value="encodeAffyEc1TestisSites"/>
|
|
<option name="EC51 Sites BrainC" value="encodeAffyEc51BrainCerebellumSites"/>
|
|
<option name="EC51 Site BrainF" value="encodeAffyEc51BrainFrontalLobeSites"/>
|
|
<option name="EC51 Site Hippoc" value="encodeAffyEc51BrainHippocampusSites"/>
|
|
<option name="EC51 Sites BrainH" value="encodeAffyEc51BrainHypothalamusSites"/>
|
|
<option name="EC51 Site FetalK" value="encodeAffyEc51FetalKidneySites"/>
|
|
<option name="EC51 Site Spleen" value="encodeAffyEc51FetalSpleenSites"/>
|
|
<option name="EC51 Site FetalT" value="encodeAffyEc51FetalTestisSites"/>
|
|
<option name="EC51 Site GM0699" value="encodeAffyEc51GM06990Sites"/>
|
|
<option name="EC51 Site HeLa" value="encodeAffyEc51HeLaC1S3Sites"/>
|
|
<option name="EC51 Site HepG2" value="encodeAffyEc51HepG2Sites"/>
|
|
<option name="EC51 Site K562" value="encodeAffyEc51K562Sites"/>
|
|
<option name="EC51 Site Ovary" value="encodeAffyEc51OvarySites"/>
|
|
<option name="EC51 Site Placen" value="encodeAffyEc51PlacentaSites"/>
|
|
<option name="EC51 Site Prost" value="encodeAffyEc51ProstateSites"/>
|
|
<option name="EC51 Site TertBJ" value="encodeAffyEc51TertBJSites"/>
|
|
<option name="EC51 Site Testis" value="encodeAffyEc51TestisSites"/>
|
|
<option name="Affy EC Sites" value="encodeAffyEcSites"/>
|
|
</option>
|
|
<option name="encodeStanfordPromoters" value="subtracks-encodeStanfordPromoters">
|
|
<option name="Stanf Promoter" value="encodeStanfordPromoters"/>
|
|
<option name="Stan Pro AGS" value="encodeStanfordPromotersAGS"/>
|
|
<option name="Stan Pro Average" value="encodeStanfordPromotersAverage"/>
|
|
<option name="Stan Pro Be2c" value="encodeStanfordPromotersBe2C"/>
|
|
<option name="Stan Pro CRL1690" value="encodeStanfordPromotersCRL1690"/>
|
|
<option name="Stan Pro G402" value="encodeStanfordPromotersG402"/>
|
|
<option name="Stan Pro HCT116" value="encodeStanfordPromotersHCT116"/>
|
|
<option name="Stan Pro HMCB" value="encodeStanfordPromotersHMCB"/>
|
|
<option name="Stan Pro HT1080" value="encodeStanfordPromotersHT1080"/>
|
|
<option name="Stan Pro HTB11" value="encodeStanfordPromotersHTB11"/>
|
|
<option name="Stan Pro Hela" value="encodeStanfordPromotersHela"/>
|
|
<option name="Stan Pro HepG2" value="encodeStanfordPromotersHepG2"/>
|
|
<option name="Stan Pro JEG3" value="encodeStanfordPromotersJEG3"/>
|
|
<option name="Stan Pro MG63" value="encodeStanfordPromotersMG63"/>
|
|
<option name="Stan Pro MRC5" value="encodeStanfordPromotersMRC5"/>
|
|
<option name="Stan Pro Panc1" value="encodeStanfordPromotersPanc1"/>
|
|
<option name="Stan Pro Snu182" value="encodeStanfordPromotersSnu182"/>
|
|
<option name="Stan Pro U87" value="encodeStanfordPromotersU87"/>
|
|
</option>
|
|
<option name="Affy RNA" value="encodeAffyRnaSuper"/>
|
|
<option name="Yale RNA" value="encodeYaleRnaSuper"/>
|
|
<option name="encodeAffyEcSignal" value="subtracks-encodeAffyEcSignal">
|
|
<option name="EC1 Sgnl BrainC" value="encodeAffyEc1BrainCerebellumSignal"/>
|
|
<option name="EC1 Sgnl BrainF" value="encodeAffyEc1BrainFrontalLobeSignal"/>
|
|
<option name="EC1 Sgnl Hippoc" value="encodeAffyEc1BrainHippocampusSignal"/>
|
|
<option name="EC1 Sgnl BrainH" value="encodeAffyEc1BrainHypothalamusSignal"/>
|
|
<option name="EC1 Sgnl FetalK" value="encodeAffyEc1FetalKidneySignal"/>
|
|
<option name="EC1 Sgnl Spleen" value="encodeAffyEc1FetalSpleenSignal"/>
|
|
<option name="EC1 Sgnl FetalT" value="encodeAffyEc1FetalTestisSignal"/>
|
|
<option name="EC1 Sgnl GM0699" value="encodeAffyEc1GM06990Signal"/>
|
|
<option name="EC1 Sgnl HeLa" value="encodeAffyEc1HeLaC1S3Signal"/>
|
|
<option name="EC1 Sgnl HepG2" value="encodeAffyEc1HepG2Signal"/>
|
|
<option name="EC1 Sgnl K562" value="encodeAffyEc1K562Signal"/>
|
|
<option name="EC1 Sgnl Ovary" value="encodeAffyEc1OvarySignal"/>
|
|
<option name="EC1 Sgnl Placen" value="encodeAffyEc1PlacentaSignal"/>
|
|
<option name="EC1 Sgnl Prost" value="encodeAffyEc1ProstateSignal"/>
|
|
<option name="EC1 Sgnl TertBJ" value="encodeAffyEc1TertBJSignal"/>
|
|
<option name="EC1 Sgnl Testis" value="encodeAffyEc1TestisSignal"/>
|
|
<option name="EC51 Sgnl BrainC" value="encodeAffyEc51BrainCerebellumSignal"/>
|
|
<option name="EC51 Sgnl BrainF" value="encodeAffyEc51BrainFrontalLobeSignal"/>
|
|
<option name="EC51 Sgnl Hippoc" value="encodeAffyEc51BrainHippocampusSignal"/>
|
|
<option name="EC51 Sgnl BrainH" value="encodeAffyEc51BrainHypothalamusSignal"/>
|
|
<option name="EC51 Sgnl FetalK" value="encodeAffyEc51FetalKidneySignal"/>
|
|
<option name="EC51 Sgnl Spleen" value="encodeAffyEc51FetalSpleenSignal"/>
|
|
<option name="EC51 Sgnl FetalT" value="encodeAffyEc51FetalTestisSignal"/>
|
|
<option name="EC51 Sgnl GM0699" value="encodeAffyEc51GM06990Signal"/>
|
|
<option name="EC51 Sgnl HeLa" value="encodeAffyEc51HeLaC1S3Signal"/>
|
|
<option name="EC51 Sgnl HepG2" value="encodeAffyEc51HepG2Signal"/>
|
|
<option name="EC51 Sgnl K562" value="encodeAffyEc51K562Signal"/>
|
|
<option name="EC51 Sgnl Ovary" value="encodeAffyEc51OvarySignal"/>
|
|
<option name="EC51 Sgnl Placen" value="encodeAffyEc51PlacentaSignal"/>
|
|
<option name="EC51 Sgnl Prost" value="encodeAffyEc51ProstateSignal"/>
|
|
<option name="EC51 Sgnl TertBJ" value="encodeAffyEc51TertBJSignal"/>
|
|
<option name="EC51 Sgnl Testis" value="encodeAffyEc51TestisSignal"/>
|
|
<option name="Affy EC Signal" value="encodeAffyEcSignal"/>
|
|
</option>
|
|
<option name="Stanf RTPCR" value="encodeStanfordRtPcr"/>
|
|
<option name="encodeAffyRnaTransfrags" value="subtracks-encodeAffyRnaTransfrags">
|
|
<option name="Affy RNA GM06990" value="encodeAffyRnaGm06990Sites"/>
|
|
<option name="Affy RNA HeLa" value="encodeAffyRnaHeLaSites"/>
|
|
<option name="Affy RNA RA 0h" value="encodeAffyRnaHl60SitesHr00"/>
|
|
<option name="Affy RNA RA 2h" value="encodeAffyRnaHl60SitesHr02"/>
|
|
<option name="Affy RNA RA 8h" value="encodeAffyRnaHl60SitesHr08"/>
|
|
<option name="Affy RNA RA 32h" value="encodeAffyRnaHl60SitesHr32"/>
|
|
<option name="Affy Transfrags" value="encodeAffyRnaTransfrags"/>
|
|
</option>
|
|
<option name="encodeYaleMASPlacRNATars" value="subtracks-encodeYaleMASPlacRNATars">
|
|
<option name="Yale NB4 NgF TAR" value="encodeYaleMASNB4RNANProtTarsFWDMless36mer36bp"/>
|
|
<option name="Yale NB4 NgR TAR" value="encodeYaleMASNB4RNANProtTarsREVMless36mer36bp"/>
|
|
<option name="Yale Plc NgF TAR" value="encodeYaleMASPlacRNANprotTarsFWDMless36mer36bp"/>
|
|
<option name="Yale Plc NgR TAR" value="encodeYaleMASPlacRNANprotTarsREVMless36mer36bp"/>
|
|
<option name="Yale MAS TAR" value="encodeYaleMASPlacRNATars"/>
|
|
<option name="Yale Plc BtF TAR" value="encodeYaleMASPlacRNATarsFwdMless36mer36bp"/>
|
|
<option name="Yale Plc BtR TAR" value="encodeYaleMASPlacRNATarsRevMless36mer36bp"/>
|
|
</option>
|
|
<option name="Affy EC" value="encodeAffyEcSuper"/>
|
|
<option name="encodeRikenCage" value="subtracks-encodeRikenCage">
|
|
<option name="Riken CAGE" value="encodeRikenCage"/>
|
|
<option name="Riken CAGE -" value="encodeRikenCageMinus"/>
|
|
<option name="Riken CAGE +" value="encodeRikenCagePlus"/>
|
|
</option>
|
|
</option>
|
|
<option name="ENCODE Chromatin Immunoprecipitation" value="group-encodeChip">
|
|
<option name="encodeAffyChIpHl60SignalStrict" value="subtracks-encodeAffyChIpHl60SignalStrict">
|
|
<option name="Affy Strict Sig" value="encodeAffyChIpHl60SignalStrict"/>
|
|
<option name="Affy H3K9ac2 0h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr00"/>
|
|
<option name="Affy H3K9ac2 2h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr02"/>
|
|
<option name="Affy H3K9ac2 8h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr08"/>
|
|
<option name="Affy H3K9ac2 32h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr32"/>
|
|
<option name="Affy H4Kac4 0h" value="encodeAffyChIpHl60SignalStrictHisH4Hr00"/>
|
|
<option name="Affy H4Kac4 2h" value="encodeAffyChIpHl60SignalStrictHisH4Hr02"/>
|
|
<option name="Affy H4Kac4 8h" value="encodeAffyChIpHl60SignalStrictHisH4Hr08"/>
|
|
<option name="Affy H4Kac4 32h" value="encodeAffyChIpHl60SignalStrictHisH4Hr32"/>
|
|
<option name="Affy Pol2 0h" value="encodeAffyChIpHl60SignalStrictPol2Hr00"/>
|
|
<option name="Affy Pol2 2h" value="encodeAffyChIpHl60SignalStrictPol2Hr02"/>
|
|
<option name="Affy Pol2 8h" value="encodeAffyChIpHl60SignalStrictPol2Hr08"/>
|
|
<option name="Affy Pol2 32h" value="encodeAffyChIpHl60SignalStrictPol2Hr32"/>
|
|
<option name="Affy p63 ME-180+" value="encodeAffyChIpHl60SignalStrictp63_ActD"/>
|
|
<option name="Affy p63 ME-180" value="encodeAffyChIpHl60SignalStrictp63_mActD"/>
|
|
</option>
|
|
<option name="Stanf ChIP" value="encodeStanfordChipSuper"/>
|
|
<option name="encodeYaleChIPSTAT1Pval" value="subtracks-encodeYaleChIPSTAT1Pval">
|
|
<option name="Yale LI PVal" value="encodeYaleChIPSTAT1HeLaBingRenPval"/>
|
|
<option name="Yale 36-36 PVal" value="encodeYaleChIPSTAT1HeLaMaskLess36mer36bpPval"/>
|
|
<option name="Yale 50-38 PVal" value="encodeYaleChIPSTAT1HeLaMaskLess50mer38bpPval"/>
|
|
<option name="Yale 50-50 PVal" value="encodeYaleChIPSTAT1HeLaMaskLess50mer50bpPval"/>
|
|
<option name="Yale STAT1 pVal" value="encodeYaleChIPSTAT1Pval"/>
|
|
</option>
|
|
<option name="encodeUtexStage" value="subtracks-encodeUtexStage">
|
|
<option name="UT-Austin STAGE" value="encodeUtexStage"/>
|
|
<option name="UT Myc HeLa Tags" value="encodeUtexStageCMycHelaTags"/>
|
|
<option name="UT STAT1 HeLa Tags" value="encodeUtexStageStat1HelaTags"/>
|
|
</option>
|
|
<option name="Sanger ChIP-chip" value="encodeSangerChipSuper"/>
|
|
<option name="encodeLIChIP" value="subtracks-encodeLIChIP">
|
|
<option name="LI ChIP Various" value="encodeLIChIP"/>
|
|
<option name="LI H3ac IMR90" value="encodeUcsdChipAch3Imr90_f"/>
|
|
<option name="LI H3K27me3 HeLa" value="encodeUcsdChipH3K27me3"/>
|
|
<option name="LI SUZ12 HeLa" value="encodeUcsdChipH3K27me3Suz12"/>
|
|
<option name="LI H3K4me2 IMR90" value="encodeUcsdChipMeh3k4Imr90_f"/>
|
|
<option name="LI Pol2 HCT116" value="encodeUcsdChipRnapHct116_f"/>
|
|
<option name="LI Pol2 HeLa" value="encodeUcsdChipRnapHela_f"/>
|
|
<option name="LI Pol2 IMR90" value="encodeUcsdChipRnapImr90_f"/>
|
|
<option name="LI Pol2 THP1" value="encodeUcsdChipRnapThp1_f"/>
|
|
<option name="LI TAF1 HCT116" value="encodeUcsdChipTaf250Hct116_f"/>
|
|
<option name="LI TAF1 HeLa" value="encodeUcsdChipTaf250Hela_f"/>
|
|
<option name="LI TAF1 IMR90" value="encodeUcsdChipTaf250Imr90_f"/>
|
|
<option name="LI TAF1 THP1" value="encodeUcsdChipTaf250Thp1_f"/>
|
|
</option>
|
|
<option name="encodeUtexChip" value="subtracks-encodeUtexChip">
|
|
<option name="UT-Austin ChIP" value="encodeUtexChip"/>
|
|
<option name="UT E2F4 st-Fb Pk" value="encodeUtexChip2091fibE2F4Peaks"/>
|
|
<option name="UT E2F4 Fb" value="encodeUtexChip2091fibE2F4Raw"/>
|
|
<option name="UT Myc Fb Pk" value="encodeUtexChip2091fibMycPeaks"/>
|
|
<option name="UT Myc Fb" value="encodeUtexChip2091fibMycRaw"/>
|
|
<option name="UT Myc st-Fb Pk" value="encodeUtexChip2091fibMycStimPeaks"/>
|
|
<option name="UT Myc st-Fb" value="encodeUtexChip2091fibMycStimRaw"/>
|
|
<option name="UT Myc HeLa Pk" value="encodeUtexChipHeLaMycPeaks"/>
|
|
<option name="UT Myc HeLa" value="encodeUtexChipHeLaMycRaw"/>
|
|
</option>
|
|
<option name="encodeYaleChipSig" value="subtracks-encodeYaleChipSig">
|
|
<option name="Yale ChIP Signal" value="encodeYaleChipSig"/>
|
|
<option name="YU BAF155 HeLa S" value="encodeYaleChipSignalBaf155"/>
|
|
<option name="YU BAF155 K562 S" value="encodeYaleChipSignalBaf155K562"/>
|
|
<option name="YU BAF170 HeLa S" value="encodeYaleChipSignalBaf170"/>
|
|
<option name="YU BAF170 K562 S" value="encodeYaleChipSignalBaf170K562"/>
|
|
<option name="YU BAF47 K562 S" value="encodeYaleChipSignalBaf47K562"/>
|
|
<option name="YU c-Fos HeLa S" value="encodeYaleChipSignalFos"/>
|
|
<option name="YU H3K27me3 HeLa S" value="encodeYaleChipSignalH3k27me3Hela"/>
|
|
<option name="YU H4Kac4 GM S" value="encodeYaleChipSignalH4kac4Gm06990"/>
|
|
<option name="YU H4Kac4 HeLa S" value="encodeYaleChipSignalH4kac4Hela"/>
|
|
<option name="YU c-Jun HeLa S" value="encodeYaleChipSignalJun"/>
|
|
<option name="YU NRSF HeLa S" value="encodeYaleChipSignalNrsfHela"/>
|
|
<option name="YU P65-C HeLa TNF S" value="encodeYaleChipSignalP65cHelaTnfa"/>
|
|
<option name="YU P65-N HeLa TNF S" value="encodeYaleChipSignalP65nHelaTnfa"/>
|
|
<option name="YU Pol2 GM S" value="encodeYaleChipSignalPol2Gm06990"/>
|
|
<option name="YU Pol2 HeLa S" value="encodeYaleChipSignalPol2Hela"/>
|
|
<option name="YU Pol2N GM S" value="encodeYaleChipSignalPol2nGm06990"/>
|
|
<option name="YU Pol2N HeLa S" value="encodeYaleChipSignalPol2nHela"/>
|
|
<option name="YU SMARCA4 HeLa S" value="encodeYaleChipSignalSmarca4Hela"/>
|
|
<option name="YU SMARCA6 HeLa S" value="encodeYaleChipSignalSmarca6Hela"/>
|
|
<option name="YU STAT1 HeLa IF S" value="encodeYaleChipSignalStat1HelaIfna"/>
|
|
<option name="YU TAF1 HeLa S" value="encodeYaleChipSignalTaf"/>
|
|
</option>
|
|
<option name="Uppsala ChIP" value="encodeUppsalaChipSuper"/>
|
|
<option name="encodeUppsalaChip" value="subtracks-encodeUppsalaChip">
|
|
<option name="Uppsala ChIP" value="encodeUppsalaChip"/>
|
|
<option name="UU H3ac HepG2" value="encodeUppsalaChipAch3"/>
|
|
<option name="UU HNF-3b HepG2" value="encodeUppsalaChipHnf3b"/>
|
|
<option name="UU HNF-4a HepG2" value="encodeUppsalaChipHnf4a"/>
|
|
<option name="UU USF-1 HepG2" value="encodeUppsalaChipUsf1"/>
|
|
</option>
|
|
<option name="encodeUcDavisChipHits" value="subtracks-encodeUcDavisChipHits">
|
|
<option name="UCD Ng ChIP Hits" value="encodeUcDavisChipHits"/>
|
|
<option name="UCD E2F1 Hits" value="encodeUcDavisChipHitsE2F1"/>
|
|
<option name="UCD c-Myc Hits" value="encodeUcDavisChipHitsMyc"/>
|
|
</option>
|
|
<option name="encodeUppsalaChipBut" value="subtracks-encodeUppsalaChipBut">
|
|
<option name="Uppsala ChIP Buty" value="encodeUppsalaChipBut"/>
|
|
<option name="UU H3ac HepG2 0h" value="encodeUppsalaChipH3acBut0h"/>
|
|
<option name="UU H3ac HepG2 12h" value="encodeUppsalaChipH3acBut12h"/>
|
|
<option name="UU H4ac HepG2 0h" value="encodeUppsalaChipH4acBut0h"/>
|
|
<option name="UU H4ac HepG2 12h" value="encodeUppsalaChipH4acBut12h"/>
|
|
</option>
|
|
<option name="encodeYaleChipSites" value="subtracks-encodeYaleChipSites">
|
|
<option name="Yale ChIP Sites" value="encodeYaleChipSites"/>
|
|
<option name="YU BAF155 HeLa" value="encodeYaleChipSitesBaf155"/>
|
|
<option name="YU BAF155 K562" value="encodeYaleChipSitesBaf155K562"/>
|
|
<option name="YU BAF170 HeLa" value="encodeYaleChipSitesBaf170"/>
|
|
<option name="YU BAF170 K562" value="encodeYaleChipSitesBaf170K562"/>
|
|
<option name="YU BAF47 K562" value="encodeYaleChipSitesBaf47K562"/>
|
|
<option name="YU c-Fos HeLa" value="encodeYaleChipSitesFos"/>
|
|
<option name="YU H3K27me3 HeLa" value="encodeYaleChipSitesH3k27me3Hela"/>
|
|
<option name="YU H4Kac4 GM" value="encodeYaleChipSitesH4kac4Gm06990"/>
|
|
<option name="YU H4Kac4 HeLa" value="encodeYaleChipSitesH4kac4Hela"/>
|
|
<option name="YU c-Jun HeLa" value="encodeYaleChipSitesJun"/>
|
|
<option name="YU NRSF HeLa" value="encodeYaleChipSitesNrsfHela"/>
|
|
<option name="YU P65-C HeLa TNF" value="encodeYaleChipSitesP65cHelaTnfa"/>
|
|
<option name="YU P65-N HeLa TNF" value="encodeYaleChipSitesP65nHelaTnfa"/>
|
|
<option name="YU Pol2 GM" value="encodeYaleChipSitesPol2Gm06990"/>
|
|
<option name="YU Pol2 HeLa" value="encodeYaleChipSitesPol2Hela"/>
|
|
<option name="YU Pol2N GM" value="encodeYaleChipSitesPol2nGm06990"/>
|
|
<option name="YU Pol2N HeLa" value="encodeYaleChipSitesPol2nHela"/>
|
|
<option name="YU SMARCA4 HeLa" value="encodeYaleChipSitesSmarca4Hela"/>
|
|
<option name="YU SMARCA6 HeLa" value="encodeYaleChipSitesSmarca6Hela"/>
|
|
<option name="YU STAT1 HeLa IF" value="encodeYaleChipSitesStat1HelaIfna"/>
|
|
<option name="YU TAF1 HeLa" value="encodeYaleChipSitesTaf"/>
|
|
</option>
|
|
<option name="encodeLIChIPgIF" value="subtracks-encodeLIChIPgIF">
|
|
<option name="LI gIF ChIP" value="encodeLIChIPgIF"/>
|
|
<option name="LI Pol2 -gIF" value="encodeUcsdChipHeLaH3H4RNAP_p0"/>
|
|
<option name="LI Pol2 +gIF" value="encodeUcsdChipHeLaH3H4RNAP_p30"/>
|
|
<option name="LI TAF1 -gIF" value="encodeUcsdChipHeLaH3H4TAF250_p0"/>
|
|
<option name="LI TAF1 +gIF" value="encodeUcsdChipHeLaH3H4TAF250_p30"/>
|
|
<option name="LI H3ac -gIF" value="encodeUcsdChipHeLaH3H4acH3_p0"/>
|
|
<option name="LI H3ac +gIF" value="encodeUcsdChipHeLaH3H4acH3_p30"/>
|
|
<option name="LI H4ac -gIF" value="encodeUcsdChipHeLaH3H4acH4_p0"/>
|
|
<option name="LI H4ac +gIF" value="encodeUcsdChipHeLaH3H4acH4_p30"/>
|
|
<option name="LI H3K4me2 -gIF" value="encodeUcsdChipHeLaH3H4dmH3K4_p0"/>
|
|
<option name="LI H3K4me2 +gIF" value="encodeUcsdChipHeLaH3H4dmH3K4_p30"/>
|
|
<option name="LI STAT1 -gIF" value="encodeUcsdChipHeLaH3H4stat1_p0"/>
|
|
<option name="LI STAT1 +gIF" value="encodeUcsdChipHeLaH3H4stat1_p30"/>
|
|
<option name="LI H3K4me3 -gIF" value="encodeUcsdChipHeLaH3H4tmH3K4_p0"/>
|
|
<option name="LI H3K4me3 +gIF" value="encodeUcsdChipHeLaH3H4tmH3K4_p30"/>
|
|
</option>
|
|
<option name="Yale WG ChIP-seq" value="wgEncodeYaleChipSeqSuper"/>
|
|
<option name="encodeStanfordChipSmoothed" value="subtracks-encodeStanfordChipSmoothed">
|
|
<option name="Stanf ChIP Score" value="encodeStanfordChipSmoothed"/>
|
|
<option name="Stan Sc HCT116 Sp1" value="encodeStanfordChipSmoothedHCT116Sp1"/>
|
|
<option name="Stan Sc HCT116 Sp3" value="encodeStanfordChipSmoothedHCT116Sp3"/>
|
|
<option name="Stan Sc Jurkat Sp1" value="encodeStanfordChipSmoothedJurkatSp1"/>
|
|
<option name="Stan Sc Jurkat Sp3" value="encodeStanfordChipSmoothedJurkatSp3"/>
|
|
<option name="Stan Sc K562 Sp1" value="encodeStanfordChipSmoothedK562Sp1"/>
|
|
<option name="Stan Sc K562 Sp3" value="encodeStanfordChipSmoothedK562Sp3"/>
|
|
</option>
|
|
<option name="encodeYaleChIPSTAT1Sites" value="subtracks-encodeYaleChIPSTAT1Sites">
|
|
<option name="Yale LI Sites" value="encodeYaleChIPSTAT1HeLaBingRenSites"/>
|
|
<option name="Yale 36-36 Sites" value="encodeYaleChIPSTAT1HeLaMaskLess36mer36bpSite"/>
|
|
<option name="Yale 50-38 Sites" value="encodeYaleChIPSTAT1HeLaMaskLess50mer38bpSite"/>
|
|
<option name="Yale 50-50 Sites" value="encodeYaleChIPSTAT1HeLaMaskLess50mer50bpSite"/>
|
|
<option name="Yale STAT1 Sites" value="encodeYaleChIPSTAT1Sites"/>
|
|
</option>
|
|
<option name="Affy ChIP" value="encodeAffyChipSuper"/>
|
|
<option name="encodeStanfordChip" value="subtracks-encodeStanfordChip">
|
|
<option name="Stanf ChIP" value="encodeStanfordChip"/>
|
|
<option name="Stan HCT116 Sp1" value="encodeStanfordChipHCT116Sp1"/>
|
|
<option name="Stan HCT116 Sp3" value="encodeStanfordChipHCT116Sp3"/>
|
|
<option name="Stan Jurkat Sp1" value="encodeStanfordChipJurkatSp1"/>
|
|
<option name="Stan Jurkat Sp3" value="encodeStanfordChipJurkatSp3"/>
|
|
<option name="Stan K562 Sp1" value="encodeStanfordChipK562Sp1"/>
|
|
<option name="Stan K562 Sp3" value="encodeStanfordChipK562Sp3"/>
|
|
</option>
|
|
<option name="encodeAffyChIpHl60SitesStrict" value="subtracks-encodeAffyChIpHl60SitesStrict">
|
|
<option name="Affy Strict Sites" value="encodeAffyChIpHl60SitesStrict"/>
|
|
<option name="Affy H3K9ac2 0h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr00"/>
|
|
<option name="Affy H3K9ac2 2h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr02"/>
|
|
<option name="Affy H3K9ac2 8h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr08"/>
|
|
<option name="Affy H3K9ac2 32h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr32"/>
|
|
<option name="Affy H4Kac4 0h" value="encodeAffyChIpHl60SitesStrictHisH4Hr00"/>
|
|
<option name="Affy H4Kac4 2h" value="encodeAffyChIpHl60SitesStrictHisH4Hr02"/>
|
|
<option name="Affy H4Kac4 8h" value="encodeAffyChIpHl60SitesStrictHisH4Hr08"/>
|
|
<option name="Affy H4Kac4 32h" value="encodeAffyChIpHl60SitesStrictHisH4Hr32"/>
|
|
<option name="Affy p63 ME-180+" value="encodeAffyChIpHl60SitesStrictP63_ActD"/>
|
|
<option name="Affy p63 ME-180" value="encodeAffyChIpHl60SitesStrictP63_mActD"/>
|
|
<option name="Affy Pol2 0h" value="encodeAffyChIpHl60SitesStrictRnapHr00"/>
|
|
<option name="Affy Pol2 2h" value="encodeAffyChIpHl60SitesStrictRnapHr02"/>
|
|
<option name="Affy Pol2 8h" value="encodeAffyChIpHl60SitesStrictRnapHr08"/>
|
|
<option name="Affy Pol2 32h" value="encodeAffyChIpHl60SitesStrictRnapHr32"/>
|
|
</option>
|
|
<option name="encodeAffyChIpHl60Pval" value="subtracks-encodeAffyChIpHl60Pval">
|
|
<option name="Affy pVal" value="encodeAffyChIpHl60Pval"/>
|
|
<option name="Affy Brg1 RA 0h" value="encodeAffyChIpHl60PvalBrg1Hr00"/>
|
|
<option name="Affy Brg1 RA 2h" value="encodeAffyChIpHl60PvalBrg1Hr02"/>
|
|
<option name="Affy Brg1 RA 8h" value="encodeAffyChIpHl60PvalBrg1Hr08"/>
|
|
<option name="Affy Brg1 RA 32h" value="encodeAffyChIpHl60PvalBrg1Hr32"/>
|
|
<option name="Affy CEBPe RA 0h" value="encodeAffyChIpHl60PvalCebpeHr00"/>
|
|
<option name="Affy CEBPe RA 2h" value="encodeAffyChIpHl60PvalCebpeHr02"/>
|
|
<option name="Affy CEBPe RA 8h" value="encodeAffyChIpHl60PvalCebpeHr08"/>
|
|
<option name="Affy CEBPe RA 32h" value="encodeAffyChIpHl60PvalCebpeHr32"/>
|
|
<option name="Affy CTCF RA 0h" value="encodeAffyChIpHl60PvalCtcfHr00"/>
|
|
<option name="Affy CTCF RA 2h" value="encodeAffyChIpHl60PvalCtcfHr02"/>
|
|
<option name="Affy CTCF RA 8h" value="encodeAffyChIpHl60PvalCtcfHr08"/>
|
|
<option name="Affy CTCF RA 32h" value="encodeAffyChIpHl60PvalCtcfHr32"/>
|
|
<option name="Affy H3K27me3 RA 0h" value="encodeAffyChIpHl60PvalH3K27me3Hr00"/>
|
|
<option name="Affy H3K27me3 RA 2h" value="encodeAffyChIpHl60PvalH3K27me3Hr02"/>
|
|
<option name="Affy H3K27me3 RA 8h" value="encodeAffyChIpHl60PvalH3K27me3Hr08"/>
|
|
<option name="Affy H3K27me3 RA 32h" value="encodeAffyChIpHl60PvalH3K27me3Hr32"/>
|
|
<option name="Affy H4Kac4 RA 0h" value="encodeAffyChIpHl60PvalH4Kac4Hr00"/>
|
|
<option name="Affy H4Kac4 RA 2h" value="encodeAffyChIpHl60PvalH4Kac4Hr02"/>
|
|
<option name="Affy H4Kac4 RA 8h" value="encodeAffyChIpHl60PvalH4Kac4Hr08"/>
|
|
<option name="Affy H4Kac4 RA 32h" value="encodeAffyChIpHl60PvalH4Kac4Hr32"/>
|
|
<option name="Affy P300 RA 0h" value="encodeAffyChIpHl60PvalP300Hr00"/>
|
|
<option name="Affy P300 RA 2h" value="encodeAffyChIpHl60PvalP300Hr02"/>
|
|
<option name="Affy P300 RA 8h" value="encodeAffyChIpHl60PvalP300Hr08"/>
|
|
<option name="Affy P300 RA 32h" value="encodeAffyChIpHl60PvalP300Hr32"/>
|
|
<option name="Affy PU1 RA 0h" value="encodeAffyChIpHl60PvalPu1Hr00"/>
|
|
<option name="Affy PU1 RA 2h" value="encodeAffyChIpHl60PvalPu1Hr02"/>
|
|
<option name="Affy PU1 RA 8h" value="encodeAffyChIpHl60PvalPu1Hr08"/>
|
|
<option name="Affy PU1 RA 32h" value="encodeAffyChIpHl60PvalPu1Hr32"/>
|
|
<option name="Affy RARA RA 0h" value="encodeAffyChIpHl60PvalRaraHr00"/>
|
|
<option name="Affy RARA RA 2h" value="encodeAffyChIpHl60PvalRaraHr02"/>
|
|
<option name="Affy RARA RA 8h" value="encodeAffyChIpHl60PvalRaraHr08"/>
|
|
<option name="Affy RARA RA 32h" value="encodeAffyChIpHl60PvalRaraHr32"/>
|
|
<option name="Affy Pol2 RA 0h" value="encodeAffyChIpHl60PvalRnapHr00"/>
|
|
<option name="Affy Pol2 RA 2h" value="encodeAffyChIpHl60PvalRnapHr02"/>
|
|
<option name="Affy Pol2 RA 8h" value="encodeAffyChIpHl60PvalRnapHr08"/>
|
|
<option name="Affy Pol2 RA 32h" value="encodeAffyChIpHl60PvalRnapHr32"/>
|
|
<option name="Affy SIRT1 RA 0h" value="encodeAffyChIpHl60PvalSirt1Hr00"/>
|
|
<option name="Affy SIRT1 RA 2h" value="encodeAffyChIpHl60PvalSirt1Hr02"/>
|
|
<option name="Affy SIRT1 RA 8h" value="encodeAffyChIpHl60PvalSirt1Hr08"/>
|
|
<option name="Affy SIRT1 RA 32h" value="encodeAffyChIpHl60PvalSirt1Hr32"/>
|
|
<option name="Affy TFIIB RA 32h" value="encodeAffyChIpHl60PvalTfiibHr32"/>
|
|
</option>
|
|
<option name="encodeYaleChipRfbr" value="subtracks-encodeYaleChipRfbr">
|
|
<option name="Yale ChIP RFBR" value="encodeYaleChipRfbr"/>
|
|
<option name="Yale RFBR Clusters" value="encodeYaleChipRfbrClusters"/>
|
|
<option name="Yale RFBR Deserts" value="encodeYaleChipRfbrDeserts"/>
|
|
</option>
|
|
<option name="encodeSangerChip" value="subtracks-encodeSangerChip">
|
|
<option name="Sanger ChIP" value="encodeSangerChip"/>
|
|
<option name="SI CTCF GM06990" value="encodeSangerChipCTCF"/>
|
|
<option name="SI H3K27me3 GM06990" value="encodeSangerChipH3K27me3"/>
|
|
<option name="SI H3K36me3 GM06990" value="encodeSangerChipH3K36me3"/>
|
|
<option name="SI H3K4m1 GM6990" value="encodeSangerChipH3K4me1"/>
|
|
<option name="SI H3K4me1 HFL-1" value="encodeSangerChipH3K4me1HFL1"/>
|
|
<option name="SI H3K4me1 HeLa" value="encodeSangerChipH3K4me1HeLa"/>
|
|
<option name="SI H3K4me1 MOLT4" value="encodeSangerChipH3K4me1Molt4"/>
|
|
<option name="SI H3K4me1 PTR8" value="encodeSangerChipH3K4me1Ptr8"/>
|
|
<option name="SI H3K4m2 GM6990" value="encodeSangerChipH3K4me2"/>
|
|
<option name="SI H3K4me2 HFL-1" value="encodeSangerChipH3K4me2HFL1"/>
|
|
<option name="SI H3K4me2 HeLa" value="encodeSangerChipH3K4me2HeLa"/>
|
|
<option name="SI H3K4me2 K562" value="encodeSangerChipH3K4me2K562"/>
|
|
<option name="SI H3K4me2 MOLT4" value="encodeSangerChipH3K4me2Molt4"/>
|
|
<option name="SI H3K4me2 PTR8" value="encodeSangerChipH3K4me2Ptr8"/>
|
|
<option name="SI H3K4m3 GM6990" value="encodeSangerChipH3K4me3"/>
|
|
<option name="SI H3K4me3 HFL-1" value="encodeSangerChipH3K4me3HFL1"/>
|
|
<option name="SI H3K4me3 HeLa" value="encodeSangerChipH3K4me3HeLa"/>
|
|
<option name="SI H3K4me3 K562" value="encodeSangerChipH3K4me3K562"/>
|
|
<option name="SI H3K4me3 MOLT4" value="encodeSangerChipH3K4me3Molt4"/>
|
|
<option name="SI H3K4me3 PTR8" value="encodeSangerChipH3K4me3Ptr8"/>
|
|
<option name="SI H3K79me3 GM06990" value="encodeSangerChipH3K79me3"/>
|
|
<option name="SI H3K9me3 GM06990" value="encodeSangerChipH3K9me3"/>
|
|
<option name="SI H3ac GM06990" value="encodeSangerChipH3ac"/>
|
|
<option name="SI H3ac HFL-1" value="encodeSangerChipH3acHFL1"/>
|
|
<option name="SI H3ac HeLa" value="encodeSangerChipH3acHeLa"/>
|
|
<option name="SI H3ac K562" value="encodeSangerChipH3acK562"/>
|
|
<option name="SI H3ac MOLT4" value="encodeSangerChipH3acMolt4"/>
|
|
<option name="SI H4ac GM06990" value="encodeSangerChipH4ac"/>
|
|
<option name="SI H4ac HFL-1" value="encodeSangerChipH4acHFL1"/>
|
|
<option name="SI H4ac HeLa" value="encodeSangerChipH4acHeLa"/>
|
|
<option name="SI H4ac K562" value="encodeSangerChipH4acK562"/>
|
|
<option name="SI H4ac MOLT4" value="encodeSangerChipH4acMolt4"/>
|
|
</option>
|
|
<option name="encodeAffyChIpHl60Sites" value="subtracks-encodeAffyChIpHl60Sites">
|
|
<option name="Affy Sites" value="encodeAffyChIpHl60Sites"/>
|
|
<option name="Affy Brg1 RA 0h" value="encodeAffyChIpHl60SitesBrg1Hr00"/>
|
|
<option name="Affy Brg1 RA 2h" value="encodeAffyChIpHl60SitesBrg1Hr02"/>
|
|
<option name="Affy Brg1 RA 8h" value="encodeAffyChIpHl60SitesBrg1Hr08"/>
|
|
<option name="Affy Brg1 RA 32h" value="encodeAffyChIpHl60SitesBrg1Hr32"/>
|
|
<option name="Affy CEBPe RA 0h" value="encodeAffyChIpHl60SitesCebpeHr00"/>
|
|
<option name="Affy CEBPe RA 2h" value="encodeAffyChIpHl60SitesCebpeHr02"/>
|
|
<option name="Affy CEBPe RA 8h" value="encodeAffyChIpHl60SitesCebpeHr08"/>
|
|
<option name="Affy CEBPe RA 32h" value="encodeAffyChIpHl60SitesCebpeHr32"/>
|
|
<option name="Affy CTCF RA 0h" value="encodeAffyChIpHl60SitesCtcfHr00"/>
|
|
<option name="Affy CTCF RA 2h" value="encodeAffyChIpHl60SitesCtcfHr02"/>
|
|
<option name="Affy CTCF RA 8h" value="encodeAffyChIpHl60SitesCtcfHr08"/>
|
|
<option name="Affy CTCF RA 32h" value="encodeAffyChIpHl60SitesCtcfHr32"/>
|
|
<option name="Affy H3K27me3 RA 0h" value="encodeAffyChIpHl60SitesH3K27me3Hr00"/>
|
|
<option name="Affy H3K27me3 RA 2h" value="encodeAffyChIpHl60SitesH3K27me3Hr02"/>
|
|
<option name="Affy H3K27me3 RA 8h" value="encodeAffyChIpHl60SitesH3K27me3Hr08"/>
|
|
<option name="Affy H3K27me3 RA 32h" value="encodeAffyChIpHl60SitesH3K27me3Hr32"/>
|
|
<option name="Affy H4Kac4 RA 0h" value="encodeAffyChIpHl60SitesH4Kac4Hr00"/>
|
|
<option name="Affy H4Kac4 RA 2h" value="encodeAffyChIpHl60SitesH4Kac4Hr02"/>
|
|
<option name="Affy H4Kac4 RA 8h" value="encodeAffyChIpHl60SitesH4Kac4Hr08"/>
|
|
<option name="Affy H4Kac4 RA 32h" value="encodeAffyChIpHl60SitesH4Kac4Hr32"/>
|
|
<option name="Affy P300 RA 0h" value="encodeAffyChIpHl60SitesP300Hr00"/>
|
|
<option name="Affy P300 RA 2h" value="encodeAffyChIpHl60SitesP300Hr02"/>
|
|
<option name="Affy P300 RA 8h" value="encodeAffyChIpHl60SitesP300Hr08"/>
|
|
<option name="Affy P300 RA 32h" value="encodeAffyChIpHl60SitesP300Hr32"/>
|
|
<option name="Affy PU1 RA 0h" value="encodeAffyChIpHl60SitesPu1Hr00"/>
|
|
<option name="Affy PU1 RA 2h" value="encodeAffyChIpHl60SitesPu1Hr02"/>
|
|
<option name="Affy PU1 RA 8h" value="encodeAffyChIpHl60SitesPu1Hr08"/>
|
|
<option name="Affy PU1 RA 32h" value="encodeAffyChIpHl60SitesPu1Hr32"/>
|
|
<option name="Affy RARA RA 0h" value="encodeAffyChIpHl60SitesRaraHr00"/>
|
|
<option name="Affy RARA RA 2h" value="encodeAffyChIpHl60SitesRaraHr02"/>
|
|
<option name="Affy RARA RA 8h" value="encodeAffyChIpHl60SitesRaraHr08"/>
|
|
<option name="Affy RARA RA 32h" value="encodeAffyChIpHl60SitesRaraHr32"/>
|
|
<option name="Affy Pol2 RA 0h" value="encodeAffyChIpHl60SitesRnapHr00"/>
|
|
<option name="Affy Pol2 RA 2h" value="encodeAffyChIpHl60SitesRnapHr02"/>
|
|
<option name="Affy Pol2 RA 8h" value="encodeAffyChIpHl60SitesRnapHr08"/>
|
|
<option name="Affy Pol2 RA 32h" value="encodeAffyChIpHl60SitesRnapHr32"/>
|
|
<option name="Affy SIRT1 RA 0h" value="encodeAffyChIpHl60SitesSirt1Hr00"/>
|
|
<option name="Affy SIRT1 RA 2h" value="encodeAffyChIpHl60SitesSirt1Hr02"/>
|
|
<option name="Affy SIRT1 RA 8h" value="encodeAffyChIpHl60SitesSirt1Hr08"/>
|
|
<option name="Affy SIRT1 RA 32h" value="encodeAffyChIpHl60SitesSirt1Hr32"/>
|
|
<option name="Affy TFIIB RA 32h" value="encodeAffyChIpHl60SitesTfiibHr32"/>
|
|
</option>
|
|
<option name="Yale ChIP" value="encodeYaleChipSuper"/>
|
|
<option name="encodeUcsdNgGif" value="subtracks-encodeUcsdNgGif">
|
|
<option name="LI Ng gIF ChIP" value="encodeUcsdNgGif"/>
|
|
<option name="LI H3ac -gIF" value="encodeUcsdNgHeLaAcH3_p0"/>
|
|
<option name="LI H3ac -gIF Pk" value="encodeUcsdNgHeLaAcH3_p0_peak"/>
|
|
<option name="LI H3ac +gIF" value="encodeUcsdNgHeLaAcH3_p30"/>
|
|
<option name="LI H3ac +gIF Pk" value="encodeUcsdNgHeLaAcH3_p30_peak"/>
|
|
<option name="LI H4ac -gIF" value="encodeUcsdNgHeLaAcH4_p0"/>
|
|
<option name="LI H4ac -gIF Pk" value="encodeUcsdNgHeLaAcH4_p0_peak"/>
|
|
<option name="LI H3K4me2 -gIF" value="encodeUcsdNgHeLaDmH3K4_p0"/>
|
|
<option name="LI H3K4m2 -IF Pk" value="encodeUcsdNgHeLaDmH3K4_p0_peak"/>
|
|
<option name="LI H3K4me2 +gIF" value="encodeUcsdNgHeLaDmH3K4_p30"/>
|
|
<option name="LI H3K4m2 +IF Pk" value="encodeUcsdNgHeLaDmH3K4_p30_peak"/>
|
|
<option name="LI H3K4me3 -gIF" value="encodeUcsdNgHeLaH3K4me3_p0"/>
|
|
<option name="LI H3K4m3 +gIF" value="encodeUcsdNgHeLaH3K4me3_p30"/>
|
|
<option name="LI Pol2 -gIF" value="encodeUcsdNgHeLaRnap_p0"/>
|
|
<option name="LI Pol2 +gIF" value="encodeUcsdNgHeLaRnap_p30"/>
|
|
<option name="LI STAT1 +gIF" value="encodeUcsdNgHeLaStat1_p30"/>
|
|
<option name="LI STAT1 +gIF Pk" value="encodeUcsdNgHeLaStat1_p30_peak"/>
|
|
</option>
|
|
<option name="encodeYaleChipPval" value="subtracks-encodeYaleChipPval">
|
|
<option name="Yale ChIP pVal" value="encodeYaleChipPval"/>
|
|
<option name="YU BAF155 HeLa P" value="encodeYaleChipPvalBaf155"/>
|
|
<option name="YU BAF155 K562 P" value="encodeYaleChipPvalBaf155K562"/>
|
|
<option name="YU BAF170 HeLa P" value="encodeYaleChipPvalBaf170"/>
|
|
<option name="YU BAF170 K562 P" value="encodeYaleChipPvalBaf170K562"/>
|
|
<option name="YU BAF47 K562 P" value="encodeYaleChipPvalBaf47K562"/>
|
|
<option name="YU c-Fos HeLa P" value="encodeYaleChipPvalFos"/>
|
|
<option name="YU H3K27me3 HeLa P" value="encodeYaleChipPvalH3k27me3Hela"/>
|
|
<option name="YU H4Kac4 GM P" value="encodeYaleChipPvalH4kac4Gm06990"/>
|
|
<option name="YU H4Kac4 HeLa P" value="encodeYaleChipPvalH4kac4Hela"/>
|
|
<option name="YU c-Jun HeLa P" value="encodeYaleChipPvalJun"/>
|
|
<option name="YU NRSF HeLa P" value="encodeYaleChipPvalNrsfHela"/>
|
|
<option name="YU P65-C HeLa TNF P" value="encodeYaleChipPvalP65cHelaTnfa"/>
|
|
<option name="YU P65-N HeLa TNF P" value="encodeYaleChipPvalP65nHelaTnfa"/>
|
|
<option name="YU Pol2 GM P" value="encodeYaleChipPvalPol2Gm06990"/>
|
|
<option name="YU Pol2 HeLa P" value="encodeYaleChipPvalPol2Hela"/>
|
|
<option name="YU Pol2N GM P" value="encodeYaleChipPvalPol2nGm06990"/>
|
|
<option name="YU Pol2N HeLa P" value="encodeYaleChipPvalPol2nHela"/>
|
|
<option name="YU SMARCA4 HeLa P" value="encodeYaleChipPvalSmarca4Hela"/>
|
|
<option name="YU SMARCA6 HeLa P" value="encodeYaleChipPvalSmarca6Hela"/>
|
|
<option name="YU STAT1 HeLa IF P" value="encodeYaleChipPvalStat1HelaIfna"/>
|
|
<option name="YU TAF1 HeLa P" value="encodeYaleChipPvalTaf"/>
|
|
</option>
|
|
<option name="UT-Austin ChIP" value="encodeUtexChipSuper"/>
|
|
<option name="encodeAffyChIpHl60PvalStrict" value="subtracks-encodeAffyChIpHl60PvalStrict">
|
|
<option name="Affy Strict pVal" value="encodeAffyChIpHl60PvalStrict"/>
|
|
<option name="Affy H3K9ac2 0h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr00"/>
|
|
<option name="Affy H3K9ac2 2h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr02"/>
|
|
<option name="Affy H3K9ac2 8h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr08"/>
|
|
<option name="Affy H3K9ac2 32h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr32"/>
|
|
<option name="Affy H4Kac4 0h" value="encodeAffyChIpHl60PvalStrictHisH4Hr00"/>
|
|
<option name="Affy H4Kac4 2h" value="encodeAffyChIpHl60PvalStrictHisH4Hr02"/>
|
|
<option name="Affy H4Kac4 8h" value="encodeAffyChIpHl60PvalStrictHisH4Hr08"/>
|
|
<option name="Affy H4Kac4 32h" value="encodeAffyChIpHl60PvalStrictHisH4Hr32"/>
|
|
<option name="Affy Pol2 0h" value="encodeAffyChIpHl60PvalStrictPol2Hr00"/>
|
|
<option name="Affy Pol2 2h" value="encodeAffyChIpHl60PvalStrictPol2Hr02"/>
|
|
<option name="Affy Pol2 8h" value="encodeAffyChIpHl60PvalStrictPol2Hr08"/>
|
|
<option name="Affy Pol2 32h" value="encodeAffyChIpHl60PvalStrictPol2Hr32"/>
|
|
<option name="Affy p63 ME-180+" value="encodeAffyChIpHl60PvalStrictp63_ActD"/>
|
|
<option name="Affy p63 ME-180" value="encodeAffyChIpHl60PvalStrictp63_mActD"/>
|
|
</option>
|
|
<option name="UC Davis ChIP" value="encodeUcDavisChipSuper"/>
|
|
<option name="encodeYaleChIPSTAT1Sig" value="subtracks-encodeYaleChIPSTAT1Sig">
|
|
<option name="Yale LI Sig" value="encodeYaleChIPSTAT1HeLaBingRenSig"/>
|
|
<option name="Yale 36-36 Sig" value="encodeYaleChIPSTAT1HeLaMaskLess36mer36bpSig"/>
|
|
<option name="Yale 50-38 Sig" value="encodeYaleChIPSTAT1HeLaMaskLess50mer38bpSig"/>
|
|
<option name="Yale 50-50 Sig" value="encodeYaleChIPSTAT1HeLaMaskLess50mer50bpSig"/>
|
|
<option name="Yale STAT1 Sig" value="encodeYaleChIPSTAT1Sig"/>
|
|
</option>
|
|
<option name="encodeUCDavisChip" value="subtracks-encodeUCDavisChip">
|
|
<option name="UCD Ng ChIP" value="encodeUCDavisChip"/>
|
|
<option name="UCD C-Myc" value="encodeUCDavisChipMyc"/>
|
|
<option name="UCD E2F1" value="encodeUCDavisE2F1Median"/>
|
|
<option name="UCD PolII_GM" value="encodeUCDavisPolIIGM"/>
|
|
<option name="UCD PolII_HelaS3" value="encodeUCDavisPolIIHelaS3"/>
|
|
<option name="UCD Taf_GM" value="encodeUCDavisTafGM"/>
|
|
<option name="UCD Taf_HelaS3" value="encodeUCDavisTafHelaS3"/>
|
|
</option>
|
|
<option name="encodeSangerChipHits" value="subtracks-encodeSangerChipHits">
|
|
<option name="SI H3K4m1 GM6990" value="encodeSangerChipHitH3K4me1GM06990"/>
|
|
<option name="SI H3K4me1 HeLa" value="encodeSangerChipHitH3K4me1HeLa"/>
|
|
<option name="SI H3K4m2 GM6990" value="encodeSangerChipHitH3K4me2GM06990"/>
|
|
<option name="SI H3K4me2 HeLa" value="encodeSangerChipHitH3K4me2HeLa"/>
|
|
<option name="SI H3K4me2 K562" value="encodeSangerChipHitH3K4me2K562"/>
|
|
<option name="SI H3K4m3 GM6990" value="encodeSangerChipHitH3K4me3GM06990"/>
|
|
<option name="SI H3K4me3 HeLa" value="encodeSangerChipHitH3K4me3HeLa"/>
|
|
<option name="SI H3K4me3 K562" value="encodeSangerChipHitH3K4me3K562"/>
|
|
<option name="SI H3ac GM06990" value="encodeSangerChipHitH3acGM06990"/>
|
|
<option name="SI H3ac HeLa" value="encodeSangerChipHitH3acHeLa"/>
|
|
<option name="SI H3ac K562" value="encodeSangerChipHitH3acK562"/>
|
|
<option name="SI H4ac GM06990" value="encodeSangerChipHitH4acGM06990"/>
|
|
<option name="SI H4ac HeLa" value="encodeSangerChipHitH4acHeLa"/>
|
|
<option name="SI H4ac K562" value="encodeSangerChipHitH4acK562"/>
|
|
<option name="Sanger ChIP Hits" value="encodeSangerChipHits"/>
|
|
</option>
|
|
<option name="LI/UCSD ChIP" value="encodeUcsdChipSuper"/>
|
|
</option>
|
|
<option name="ENCODE Chromosome, Chromatin and DNA Structure" value="group-encodeChrom">
|
|
<option name="BU ORChID" value="encodeBUORChID"/>
|
|
<option name="encodeUncFaire" value="subtracks-encodeUncFaire">
|
|
<option name="UNC FAIRE" value="encodeUncFaire"/>
|
|
<option name="FAIRE Signal" value="encodeUncFaireSignal"/>
|
|
</option>
|
|
<option name="encodeUvaDnaRepOrigins" value="subtracks-encodeUvaDnaRepOrigins">
|
|
<option name="UVa DNA Rep Ori" value="encodeUvaDnaRepOrigins"/>
|
|
<option name="UVa Ori-Bubble HeLa" value="encodeUvaDnaRepOriginsBubbleHela"/>
|
|
<option name="UVa Ori-NS GM" value="encodeUvaDnaRepOriginsNSGM"/>
|
|
<option name="UVa Ori-NS HeLa" value="encodeUvaDnaRepOriginsNSHela"/>
|
|
<option name="UVa Ori-TR50 HeLa" value="encodeUvaDnaRepOriginsTR50Hela"/>
|
|
</option>
|
|
<option name="UVa DNA Rep TR50" value="encodeUvaDnaRepTr50"/>
|
|
<option name="UVa DNA Rep" value="encodeUvaDnaRepSuper"/>
|
|
<option name="encodeUvaDnaRepSeg" value="subtracks-encodeUvaDnaRepSeg">
|
|
<option name="UVa DNA Rep Early" value="encodeUvaDnaRepEarly"/>
|
|
<option name="UVa DNA Rep Late" value="encodeUvaDnaRepLate"/>
|
|
<option name="UVa DNA Rep Mid" value="encodeUvaDnaRepMid"/>
|
|
<option name="UVa DNA Rep PanS" value="encodeUvaDnaRepPanS"/>
|
|
<option name="UVa DNA Rep Seg" value="encodeUvaDnaRepSeg"/>
|
|
</option>
|
|
<option name="encodeRegulomeDnaseArray" value="subtracks-encodeRegulomeDnaseArray">
|
|
<option name="UW DNase-array" value="encodeRegulomeDnaseArray"/>
|
|
<option name="DnaseI Sens" value="encodeRegulomeDnaseGM06990Sens"/>
|
|
</option>
|
|
<option name="UW DNase" value="encodeUwDnaseSuper"/>
|
|
<option name="encodeUWRegulomeBase" value="subtracks-encodeUWRegulomeBase">
|
|
<option name="UW DNase-QCP" value="encodeUWRegulomeBase"/>
|
|
<option name="CD4" value="encodeUWRegulomeBaseCD4"/>
|
|
<option name="CaCo2" value="encodeUWRegulomeBaseCaCo2"/>
|
|
<option name="CaLU3" value="encodeUWRegulomeBaseCaLU3"/>
|
|
<option name="EryAdult" value="encodeUWRegulomeBaseEryAdult"/>
|
|
<option name="EryFetal" value="encodeUWRegulomeBaseEryFetal"/>
|
|
<option name="GM" value="encodeUWRegulomeBaseGM"/>
|
|
<option name="HMEC" value="encodeUWRegulomeBaseHMEC"/>
|
|
<option name="HRE" value="encodeUWRegulomeBaseHRE"/>
|
|
<option name="HeLa" value="encodeUWRegulomeBaseHeLa"/>
|
|
<option name="HepG2" value="encodeUWRegulomeBaseHepG2"/>
|
|
<option name="Huh7" value="encodeUWRegulomeBaseHuh7"/>
|
|
<option name="K562" value="encodeUWRegulomeBaseK562"/>
|
|
<option name="NHBE" value="encodeUWRegulomeBaseNHBE"/>
|
|
<option name="PANC" value="encodeUWRegulomeBasePANC"/>
|
|
<option name="SAEC" value="encodeUWRegulomeBaseSAEC"/>
|
|
<option name="SKnSH" value="encodeUWRegulomeBaseSKnSH"/>
|
|
</option>
|
|
<option name="encodeNhgriDukeDnaseHs" value="subtracks-encodeNhgriDukeDnaseHs">
|
|
<option name="DNase CD4 Raw" value="encodeNhgriDnaseHsChipRawCd4"/>
|
|
<option name="DNase GM069 Raw" value="encodeNhgriDnaseHsChipRawGm06990"/>
|
|
<option name="DNase H9 Raw" value="encodeNhgriDnaseHsChipRawH9"/>
|
|
<option name="DNase HeLa Raw" value="encodeNhgriDnaseHsChipRawHela"/>
|
|
<option name="DNase HepG2 Raw" value="encodeNhgriDnaseHsChipRawHepG2"/>
|
|
<option name="DNase IMR90 Raw" value="encodeNhgriDnaseHsChipRawImr90"/>
|
|
<option name="DNase K562 Raw" value="encodeNhgriDnaseHsChipRawK562"/>
|
|
<option name="Duke/NHGRI DNase" value="encodeNhgriDukeDnaseHs"/>
|
|
</option>
|
|
<option name="encodeUvaDnaRep" value="subtracks-encodeUvaDnaRep">
|
|
<option name="UVa DNA Rep" value="encodeUvaDnaRep"/>
|
|
<option name="UVa DNA Rep 0h" value="encodeUvaDnaRep0"/>
|
|
<option name="UVa DNA Rep 2h" value="encodeUvaDnaRep2"/>
|
|
<option name="UVa DNA Rep 4h" value="encodeUvaDnaRep4"/>
|
|
<option name="UVa DNA Rep 6h" value="encodeUvaDnaRep6"/>
|
|
<option name="UVa DNA Rep 8h" value="encodeUvaDnaRep8"/>
|
|
</option>
|
|
</option>
|
|
<option name="ENCODE Regions and Genes" value="group-encodeGenes">
|
|
<option name="encodeGencodeGeneMar07" value="subtracks-encodeGencodeGeneMar07">
|
|
<option name="Gencode Ref" value="encodeGencodeGeneKnownMar07"/>
|
|
<option name="Gencode Genes Mar07" value="encodeGencodeGeneMar07"/>
|
|
<option name="Gencode Polymorph" value="encodeGencodeGenePolymorphicMar07"/>
|
|
<option name="Gencode Pseudo" value="encodeGencodeGenePseudoMar07"/>
|
|
<option name="Gencode Putative" value="encodeGencodeGenePutativeMar07"/>
|
|
</option>
|
|
<option name="Vienna RNAz" value="encodeUViennaRnaz"/>
|
|
<option name="Gencode Genes" value="encodeGencodeSuper"/>
|
|
<option name="EGASP" value="encodeEgaspSuper"/>
|
|
<option name="encodeGencodeRaceFrags" value="subtracks-encodeGencodeRaceFrags">
|
|
<option name="Gencode RACEfrags" value="encodeGencodeRaceFrags"/>
|
|
<option name="RACEfrags Brain" value="encodeGencodeRaceFragsBrain"/>
|
|
<option name="RACEfrags Colon" value="encodeGencodeRaceFragsColon"/>
|
|
<option name="RACEfrags GM06990" value="encodeGencodeRaceFragsGM06990"/>
|
|
<option name="RACEfrags HL60" value="encodeGencodeRaceFragsHL60"/>
|
|
<option name="RACEfrags Heart" value="encodeGencodeRaceFragsHeart"/>
|
|
<option name="RACEfrags HeLaS3" value="encodeGencodeRaceFragsHela"/>
|
|
<option name="RACEfrags Kidney" value="encodeGencodeRaceFragsKidney"/>
|
|
<option name="RACEfrags Liver" value="encodeGencodeRaceFragsLiver"/>
|
|
<option name="RACEfrags Lung" value="encodeGencodeRaceFragsLung"/>
|
|
<option name="RACEfrags Muscle" value="encodeGencodeRaceFragsMuscle"/>
|
|
<option name="RACEfrags Placenta" value="encodeGencodeRaceFragsPlacenta"/>
|
|
<option name="RACEfrags Primer" value="encodeGencodeRaceFragsPrimer"/>
|
|
<option name="RACEfrags Sm Int" value="encodeGencodeRaceFragsSmallIntest"/>
|
|
<option name="RACEfrags Spleen" value="encodeGencodeRaceFragsSpleen"/>
|
|
<option name="RACEfrags Stomach" value="encodeGencodeRaceFragsStomach"/>
|
|
<option name="RACEfrags Testis" value="encodeGencodeRaceFragsTestis"/>
|
|
</option>
|
|
<option name="Known+Pred RNA" value="encodeRna"/>
|
|
<option name="encodeEgaspFull" value="subtracks-encodeEgaspFull">
|
|
<option name="EGASP Full" value="encodeEgaspFull"/>
|
|
<option name="AceView" value="encodeEgaspFullAceview"/>
|
|
<option name="DOGFISH-C" value="encodeEgaspFullDogfish"/>
|
|
<option name="Ensembl" value="encodeEgaspFullEnsembl"/>
|
|
<option name="Ensembl Pseudo" value="encodeEgaspFullEnsemblPseudo"/>
|
|
<option name="Exogean" value="encodeEgaspFullExogean"/>
|
|
<option name="ExonHunter" value="encodeEgaspFullExonhunter"/>
|
|
<option name="Fgenesh++" value="encodeEgaspFullFgenesh"/>
|
|
<option name="GeneID" value="encodeEgaspFullGeneId"/>
|
|
<option name="GeneID U12" value="encodeEgaspFullGeneIdU12"/>
|
|
<option name="GeneMark" value="encodeEgaspFullGenemark"/>
|
|
<option name="Jigsaw" value="encodeEgaspFullJigsaw"/>
|
|
<option name="Pairgn/NSCAN-E/+" value="encodeEgaspFullPairagonAny"/>
|
|
<option name="Pairgn/NSCAN-E" value="encodeEgaspFullPairagonMrna"/>
|
|
<option name="NSCAN" value="encodeEgaspFullPairagonMultiple"/>
|
|
<option name="SGP2" value="encodeEgaspFullSgp2"/>
|
|
<option name="SGP2 U12" value="encodeEgaspFullSgp2U12"/>
|
|
<option name="Fgenesh Pseudo" value="encodeEgaspFullSoftberryPseudo"/>
|
|
<option name="SPIDA Exons" value="encodeEgaspFullSpida"/>
|
|
<option name="Twinscan" value="encodeEgaspFullTwinscan"/>
|
|
</option>
|
|
<option name="encodeGencodeGeneOct05" value="subtracks-encodeGencodeGeneOct05">
|
|
<option name="Gencode Ref" value="encodeGencodeGeneKnownOct05"/>
|
|
<option name="Gencode Genes Oct05" value="encodeGencodeGeneOct05"/>
|
|
<option name="Gencode Pseudo" value="encodeGencodeGenePseudoOct05"/>
|
|
<option name="Gencode Putative" value="encodeGencodeGenePutativeOct05"/>
|
|
</option>
|
|
<option name="Gencode Introns Oct05" value="encodeGencodeIntronOct05"/>
|
|
<option name="encodePseudogene" value="subtracks-encodePseudogene">
|
|
<option name="Pseudogenes" value="encodePseudogene"/>
|
|
<option name="Consensus Pseudogenes" value="encodePseudogeneConsensus"/>
|
|
<option name="GIS Pseudogenes" value="encodePseudogeneGIS"/>
|
|
<option name="Havana-Gencode Pseudogenes" value="encodePseudogeneHavana"/>
|
|
<option name="UCSC Retrogenes" value="encodePseudogeneUcsc"/>
|
|
<option name="UCSC Pseudogenes" value="encodePseudogeneUcsc2"/>
|
|
<option name="Yale Pseudogenes" value="encodePseudogeneYale"/>
|
|
</option>
|
|
<option name="ENCODE Regions" value="encodeRegions"/>
|
|
<option name="encodeEgaspUpdate" value="subtracks-encodeEgaspUpdate">
|
|
<option name="Augustus Update" value="encodeEgaspUpdAugustusAbinitio"/>
|
|
<option name="August/EST/Ms Upd" value="encodeEgaspUpdAugustusAny"/>
|
|
<option name="August/Mouse Upd" value="encodeEgaspUpdAugustusDual"/>
|
|
<option name="Augustus/EST Upd" value="encodeEgaspUpdAugustusEst"/>
|
|
<option name="Exogean Update" value="encodeEgaspUpdExogean"/>
|
|
<option name="FGenesh++ Upd" value="encodeEgaspUpdFgenesh"/>
|
|
<option name="GeneID Update" value="encodeEgaspUpdGeneId"/>
|
|
<option name="GeneID U12 Upd" value="encodeEgaspUpdGeneIdU12"/>
|
|
<option name="Jigsaw Update" value="encodeEgaspUpdJigsaw"/>
|
|
<option name="SGP2 Update" value="encodeEgaspUpdSgp2"/>
|
|
<option name="SGP2 U12 Update" value="encodeEgaspUpdSgp2U12"/>
|
|
<option name="Yale Pseudo Upd" value="encodeEgaspUpdYalePseudo"/>
|
|
<option name="EGASP Update" value="encodeEgaspUpdate"/>
|
|
</option>
|
|
<option name="encodeEgaspPartial" value="subtracks-encodeEgaspPartial">
|
|
<option name="ACEScan Cons Alt" value="encodeEgaspPartAceCons"/>
|
|
<option name="ACEScan Other" value="encodeEgaspPartAceOther"/>
|
|
<option name="Augustus" value="encodeEgaspPartAugustusAbinitio"/>
|
|
<option name="Augustus/EST/Mouse" value="encodeEgaspPartAugustusAny"/>
|
|
<option name="Augustus/Mouse" value="encodeEgaspPartAugustusDual"/>
|
|
<option name="Augustus/EST" value="encodeEgaspPartAugustusEst"/>
|
|
<option name="GeneZilla" value="encodeEgaspPartGenezilla"/>
|
|
<option name="SAGA" value="encodeEgaspPartSaga"/>
|
|
<option name="EGASP Partial" value="encodeEgaspPartial"/>
|
|
</option>
|
|
</option>
|
|
</options>
|
|
</filter>
|