Greg Von Kuster 8ba7de4c8b Improved checking to determine if a bam file is sorted. If the version of samtools being used is 0.1.13 or newer, determination of bam sorting is now much more robust. Add a new functional test to the test_library_features script that tests uploading a library_dataset (where the file is an unsorted bam file) using a combination of 'upload_paths' and 'link_to_files'. Rename the test-data file previously named 3.bam to now be named 3unsorted.bam to clarify that it is an unsorted bam file.

2011-03-23 12:18:57 -04:00

..

__init__.py

More moving things around.

2006-11-15 16:32:54 +00:00

test_db_util.py

Rewrite the functional tests that cover all Galaxy forms related behavior. Clean up / fix bugs in several sample run request templates. Fix a bug introduced in change set a8cdece11998 which incorrectly generated selected options in a select list in the data library framework.

2010-09-22 16:38:49 -04:00

twilltestcase.py

Improved checking to determine if a bam file is sorted. If the version of samtools being used is 0.1.13 or newer, determination of bam sorting is now much more robust. Add a new functional test to the test_library_features script that tests uploading a library_dataset (where the file is an unsorted bam file) using a combination of 'upload_paths' and 'link_to_files'. Rename the test-data file previously named 3.bam to now be named 3unsorted.bam to clarify that it is an unsorted bam file.

2011-03-23 12:18:57 -04:00