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galaxy/run.sh
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#!/bin/sh
cd `dirname $0`
# explicitly attempt to fetch eggs before running
FETCH_EGGS=1
for arg in "$@"; do
[ "$arg" = "--stop-daemon" ] && FETCH_EGGS=0; break
done
if [ $FETCH_EGGS -eq 1 ]; then
python ./scripts/check_eggs.py quiet
if [ $? -ne 0 ]; then
echo "Some eggs are out of date, attempting to fetch..."
python ./scripts/fetch_eggs.py
if [ $? -eq 0 ]; then
echo "Fetch successful."
else
echo "Fetch failed."
exit 1
fi
fi
fi
# Temporary: since builds.txt is now removed from source control, create it
# from the sample if necessary
if [ ! -f "tool-data/shared/ucsc/builds.txt" ]; then
cp tool-data/shared/ucsc/builds.txt.sample tool-data/shared/ucsc/builds.txt
fi
python ./scripts/paster.py serve universe_wsgi.ini $@