Marius van den Beek cae6c3d721 Merge pull request #15347 from mvdbeek/stabilize_integration_test ...

Stabilize mulled integration tests

2023-01-22 10:55:58 +01:00

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chained_dyndest_rules

Apply black formatting.

2022-02-03 07:42:20 -05:00

cloudauthz

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

delay_rules

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mock_biotools_content/data

Parse edam operation and topic data from bio.tools if available.

2021-09-07 14:29:38 -04:00

objectstore

Fix test_objectstore_datatype_upload.py . More type annotations

2022-11-23 01:19:59 +00:00

objectstore_selection_rules

Apply black formatting.

2022-02-03 07:42:20 -05:00

panel_views_1

Allow static panel views without explicit "items" - just start with integrated panel and apply filters.

2021-09-15 10:50:57 -04:00

resubmission_rules

Apply black formatting.

2022-02-03 07:42:20 -05:00

webdav

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__init__.py

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chained_dyndest_job_conf.xml

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conftest.py

Enable celery in API, Selenium, Integration tests

2022-05-25 19:46:47 +02:00

delay_job_conf.yml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

dockerized_job_conf.yml

Support setting per-job-environment container resolvers using the container_resolvers key in the environment config.

2021-08-17 10:28:51 -04:00

embedded_pulsar_docker_job_conf.yml

Drop more uWSGI legacy things

2022-03-15 21:32:00 +01:00

embedded_pulsar_job_conf.xml

Use remote_metadata: true when using extended metadata

2021-10-26 17:59:05 +02:00

embedded_pulsar_metadata_extended_job_conf.yml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

embedded_pulsar_metadata_job_conf.yml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

embedded_pulsar_singularity_job_conf.yml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

file_sources_conf_vault.yml

Add new secret type to user preferences that is not sent to client

2021-12-01 10:48:36 +05:30

file_sources_conf.yml

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handler_template_job_conf.xml

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io_injection_job_conf.yml

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refgenie.yml

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resubmission_default_job_conf.yml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

resubmission_dynamic_job_conf.xml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

resubmission_job_conf.yml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

resubmission_job_resource_parameters_conf.xml

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resubmission_pulsar_job_conf.xml

Allow specifying useful classes of tools for mapping in job conf.

2021-07-14 13:46:56 -04:00

resubmission_runners.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

resubmission_small_memory_job_conf.xml

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resubmission_small_memory_resubmission_to_large_job_conf.xml

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resubmission_tool_detected_always_error_job_conf.xml

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resubmission_tool_detected_resubmit_job_conf.xml

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sets_tmp_dir_expression_job_conf.xml

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sets_tmp_dir_to_true_job_conf.xml

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simple_job_conf.xml

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singularity_job_conf.yml

Support setting per-job-environment container resolvers using the container_resolvers key in the environment config.

2021-08-17 10:28:51 -04:00

test_apache_nginx_sendfile.py

Merge remote-tracking branch 'upstream/release_22.05' into dev

2022-11-16 12:07:04 +01:00

test_async_downloads.py

Replace `unittest.TestCase` in API, framework, performance, Selenium and ToolShed tests

2022-11-07 15:44:01 +00:00

test_celery_tasks.py

Ignore 2 type errors in tests

2022-11-29 14:59:17 -05:00

test_chained_dynamic_destinations.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_change_datatype_with_store_by_id.py

Rename class which is not derived from `TestCase`

2022-11-07 15:44:03 +00:00

test_cli_runners.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_coexecution.py

Use `history_id` fixture instead of instance attribute. More type annotations

2022-11-23 04:04:51 +00:00

test_config_options_users.py

Fix Integeration typo

2022-11-23 01:20:00 +00:00

test_config_schema.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_configuration_decode.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_containerized_jobs.py

Stabilize mulled integration tests

2023-01-21 12:36:54 +01:00

test_data_manager_refgenie.py

Even more typing

2022-11-28 04:50:00 +00:00

test_data_manager.py

Even more typing

2022-11-28 04:50:00 +00:00

test_datatype_upload.py

Fix test_objectstore_datatype_upload.py . More type annotations

2022-11-23 01:19:59 +00:00

test_default_permissions.py

Use `history_id` fixture instead of instance attribute. More type annotations

2022-11-23 04:04:51 +00:00

test_dynamic_edam_loading.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_edam_toolbox.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_extended_metadata_mapping.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_extended_metadata_outputs_to_working_directory.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_extended_metadata.py

Merge branch 'release_22.05' into dev

2022-11-28 15:22:49 +00:00

test_fail_job_tool_unavailable.py

use history_id fixture instead of instance variable with the same name

2022-11-23 01:19:59 +00:00

test_fluent_metrics.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_flush_per_n_datasets.py

Use celery in more integration tests

2022-05-26 12:48:44 +02:00

test_galaxy_interactor.py

Type+PydanticModel more tool test code.

2022-12-12 17:54:02 -05:00

test_genomes.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_handler_assignment_methods.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_history_import_export.py

Increase test_export_tracking coverage

2022-12-09 12:06:36 +01:00

test_interactivetools_api.py

Merge branch 'release_22.05' into dev

2023-01-03 13:13:53 -08:00

test_job_environments.py

Use `history_id` fixture instead of instance attribute. More type annotations

2022-11-23 04:04:51 +00:00

test_job_files.py

Fix Integeration typo

2022-11-23 01:20:00 +00:00

test_job_outputs_to_working_directory.py

Use celery in more integration tests

2022-05-26 12:48:44 +02:00

test_job_recovery.py

Even more typing

2022-11-28 04:50:00 +00:00

test_job_resubmission.py

Fix Integeration typo

2022-11-23 01:20:00 +00:00

test_kubernetes_runner.py

Merge branch 'release_22.05' into dev

2022-11-28 15:22:49 +00:00

test_local_job_cancellation.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_materialize_dataset_instance_tasks.py

Replace `unittest.TestCase` in API, framework, performance, Selenium and ToolShed tests

2022-11-07 15:44:01 +00:00

test_max_discovered_files.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_model_store_scripts.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_page_revision_json_encoding.py

use history_id fixture instead of instance variable with the same name

2022-11-23 01:19:59 +00:00

test_panel_views.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_pulsar_embedded_containers.py

Use `history_id` fixture instead of instance attribute. More type annotations

2022-11-23 04:04:51 +00:00

test_pulsar_embedded_copy_working.py

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test_pulsar_embedded_extended_metadata.py

Progress toward fixing extended metadata with Pulsar

2022-11-02 08:59:12 -04:00

test_pulsar_embedded_mq.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_pulsar_embedded_remote_metadata.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_pulsar_embedded.py

Use celery in more integration tests

2022-05-26 12:48:44 +02:00

test_purge_datasets.py

Update purge dataset for new testcase-less testing

2023-01-21 13:28:13 +01:00

test_quota.py

Merge pull request #14981 from davelopez/22.05_fix_invalid_quota_amount

2022-11-14 10:39:19 -05:00

test_remote_files_histories.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_remote_files_posix.py

Relax file source access requirements in tests

2022-12-08 13:33:08 +01:00

test_remote_files.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_repository_operations.py

Extend tool shed install testing to include index API.

2022-10-10 11:19:18 -04:00

test_resolvers.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_save_job_id_on_datasets.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_scripts.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_shed_tool_tests.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_tool_data_bundles.py

Data manager bundles.

2022-12-20 10:35:17 -05:00

test_tool_data_delete.py

Data manager bundles.

2022-12-20 10:35:17 -05:00

test_upload_configuration_options.py

Fix test_objectstore_datatype_upload.py . More type annotations

2022-11-23 01:19:59 +00:00

test_user_preferences.py

Add integration test

2023-01-09 17:29:37 -05:00

test_vault_extra_prefs.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_vault_file_source.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_web_framework_config.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_webdav.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_work_queue_put_failure.py

use history_id fixture instead of instance variable with the same name

2022-11-23 01:19:59 +00:00

test_workflow_handler_configuration.py

use history_id fixture instead of instance variable with the same name

2022-11-23 01:19:59 +00:00

test_workflow_invocation.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_workflow_refactoring.py

Fixup types surrounding workflow refactoring testing.

2022-12-12 10:18:20 -05:00

test_workflow_scheduling_options.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_workflow_sync.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_workflow_tasks.py

Validate BioCompute Objects against schema in tests

2022-10-14 12:20:24 +02:00

user_preferences_extra_conf.yml

Change vault api test case to integration test case and add missing conditional requirements

2021-12-20 18:23:00 +05:30

vault_conf.yml

Make sure filesources can access user level and app level vaults

2021-11-28 06:56:35 +05:30

workflow_handler_configuration_job_conf.xml

…