Files
galaxy/packages/data
mvdbeek f978800d69 Revert sqlalchemy-json work for now
I'm still seeing errors in some places, and just changing everything to
SimpleJSON seems a bit risky at this point.
We'll have to live with
```
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/datatypes/registry.py", line 590, in change_datatype
    data.init_meta(copy_from=data)
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/model/__init__.py", line 2783, in init_meta
    return self.datatype.init_meta(self, copy_from=copy_from)
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/datatypes/data.py", line 171, in init_meta
    dataset.metadata = copy_from.metadata
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/model/__init__.py", line 2705, in set_metadata
    self._metadata = self.metadata.make_dict_copy(bunch)
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/model/metadata.py", line 161, in make_dict_copy
    rval[key] = self.spec[key].param.make_copy(value, target_context=self, source_context=to_copy)
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/model/metadata.py", line 281, in make_copy
    return copy.deepcopy(value)
  File "/cvmfs/main.galaxyproject.org/deps/_conda/envs/_galaxy_/lib/python3.6/copy.py", line 161, in deepcopy
    y = copier(memo)
  File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/model/custom_types.py", line 232, in __deepcopy__
    return MutationList(MutationObj.coerce(self._key, copy.deepcopy(self[:])))
AttributeError: 'MutationList' object has no attribute '_key'
```
for now.
2021-02-13 16:09:10 +01:00
..
2020-10-15 12:09:04 -04:00
2019-03-28 09:17:51 -04:00
2019-03-28 09:17:51 -04:00

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   :target: https://pypi.org/project/galaxy-data/


Overview
--------

The Galaxy_ models, datatype framework, and datatype implementations.

* Free software: Academic Free License version 3.0
* Code: https://github.com/galaxyproject/galaxy

.. _Galaxy: http://galaxyproject.org/