mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-24 02:04:04 +08:00
Nicola Soranzo
88d3849960
Pydantic <2.7.4 is broken on Python>=3.12.4 , see https://github.com/pydantic/pydantic/issues/9609 . Fixed upstream in https://github.com/pydantic/pydantic/pull/9639 . Fix the following traceback in startup test on Python 3.12: ``` Traceback (most recent call last): File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/bin/galaxyctl", line 10, in <module> sys.exit(galaxyctl()) ^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/click/core.py", line 1157, in __call__ return self.main(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/click/core.py", line 1078, in main rv = self.invoke(ctx) ^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/click/core.py", line 1682, in invoke cmd_name, cmd, args = self.resolve_command(ctx, args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/click/core.py", line 1729, in resolve_command cmd = self.get_command(ctx, cmd_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/gravity/cli.py", line 59, in get_command return name_to_command(name) ^^^^^^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/gravity/cli.py", line 45, in name_to_command mod = __import__(mod_name, None, None, ["cli"]) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/gravity/commands/cmd_stop.py", line 4, in <module> from gravity import process_manager File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/gravity/process_manager/__init__.py", line 14, in <module> from gravity.config_manager import ConfigManager File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/gravity/config_manager.py", line 18, in <module> from gravity.state import ConfigFile, service_for_service_type File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/gravity/state.py", line 42, in <module> class ConfigFile(BaseModel): File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/pydantic/v1/main.py", line 286, in __new__ cls.__try_update_forward_refs__() File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/pydantic/v1/main.py", line 807, in __try_update_forward_refs__ update_model_forward_refs(cls, cls.__fields__.values(), cls.__config__.json_encoders, localns, (NameError,)) File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/pydantic/v1/typing.py", line 554, in update_model_forward_refs update_field_forward_refs(f, globalns=globalns, localns=localns) File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/pydantic/v1/typing.py", line 520, in update_field_forward_refs field.type_ = evaluate_forwardref(field.type_, globalns, localns or None) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/runner/work/galaxy/galaxy/galaxy root/.venv/lib/python3.12/site-packages/pydantic/v1/typing.py", line 66, in evaluate_forwardref return cast(Any, type_)._evaluate(globalns, localns, set()) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ TypeError: ForwardRef._evaluate() missing 1 required keyword-only argument: 'recursive_guard' ``` Example: https://github.com/galaxyproject/galaxy/actions/runs/9581802216/job/26419972297
52 lines
1.3 KiB
INI
52 lines
1.3 KiB
INI
[metadata]
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author = Galaxy Project and Community
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author_email = galaxy-committers@lists.galaxyproject.org
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classifiers =
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Development Status :: 5 - Production/Stable
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Environment :: Console
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Intended Audience :: Developers
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License :: OSI Approved :: Academic Free License (AFL)
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Natural Language :: English
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Operating System :: POSIX
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Programming Language :: Python :: 3
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Programming Language :: Python :: 3.8
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Programming Language :: Python :: 3.9
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Programming Language :: Python :: 3.10
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Programming Language :: Python :: 3.11
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Programming Language :: Python :: 3.12
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Topic :: Software Development
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Topic :: Software Development :: Code Generators
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Topic :: Software Development :: Testing
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description = Galaxy web framework
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keywords =
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Galaxy
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license = AFL
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license_files =
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LICENSE
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long_description = file: README.rst, HISTORY.rst
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long_description_content_type = text/x-rst
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name = galaxy-web-framework
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url = https://github.com/galaxyproject/galaxy
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version = 23.2.dev0
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[options]
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include_package_data = True
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install_requires =
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galaxy-data
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galaxy-util
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babel
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MarkupSafe
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paste
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pydantic>=2.7.4
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requests
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Routes
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SQLAlchemy>=2.0,<2.1
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WebOb
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packages = find:
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python_requires = >=3.8
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[options.packages.find]
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exclude =
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tests*
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