John Chilton 5410d476e8 Dataset collections - "reduce" with existing tools. ...

Allow users to select dataset collections in place of individual datasets for data tool parameters with multiple="true" enabled (if all elements of collection would be valid as input to this parameter).

Restrict collection reductions to flat collections. If a user wanted to reduce a nested collection they probably want to map of the subcollections reducing each and building a collection of the reductions. TODO: The sentence is probably unintelligiable, need to provide a concrete example.

A functional test demonstrating these reductions in included.

2014-05-06 08:54:30 -05:00

..

libs

Correct usage of "it's" versus "its".

2014-04-17 15:49:32 -04:00

mvc

Rename historyPanel.refershHdas to refreshContents.

2014-05-06 08:54:30 -05:00

nls

UI: rework zh and ja locale data

2014-04-22 11:58:22 -04:00

packed

data libraries: when importing into history set it as current and provide link to the 'Analyze page' so users can switch quickly

2014-05-05 13:51:13 -04:00

rgenetics

More JS file reorganization: (a) move IE and rgenetics into their own directories; (b) move additional external libraries to libs.

2012-08-21 16:54:19 -04:00

templates

Remove handlebars common-template helpers, remove unused templates

2014-03-20 14:16:13 -04:00

tools/rgenetics

moved the rgGRR svg scripts to static/scripts/tools/rgenetics and decreased chattiness in genetics.py

2009-10-15 19:01:07 -04:00

utils

Metrics: make the cache use localStorage for persistence

2014-04-21 11:37:26 -04:00

viz

Trackster: add color for read track histograms so that histograms are colorful. Read blocks are still gray to allow for seeing variants easily.

2014-04-23 13:56:26 -04:00

base.js

trackster: misc fixes and reorganization

2012-09-17 16:14:52 -04:00

galaxy-app-base.js

QA: add qunit tests for galaxy-app-base; Fix defaults in metrics-logger tests

2014-04-18 09:56:31 -04:00

galaxy.autocom_tagging.js

style: remove use of tooltip class, always show tooltip for any element with title attribute, and use standard bootstrap tooltip component.

2013-09-09 13:40:13 -04:00

galaxy.base.js

Do not propagate keyboard events in JS editable text plugin; this prevents unwanted side effects with other elmements on the page using keyboard events.

2014-04-25 16:58:21 -04:00

galaxy.frame.js

UI: Modularize scratch book and make it reusable as regular ui element, refactor charts

2014-03-24 04:50:52 -04:00

galaxy.library.js

data libraries: router improvements, detecting whether the loaded page is the first page of the app (user came from outside) or within and navigating accordingly

2014-05-05 13:03:16 -04:00

galaxy.masthead.js

Fix small bug in handling of 'brand' text.

2014-01-20 09:39:12 -06:00

galaxy.menu.js

rename biostar menu link

2014-04-22 10:53:35 -04:00

galaxy.pages.js

History: remove unused server templates history_common, history_item, and history_annotation_table; Pages: remove unused dialog for annotated histories

2014-05-01 09:17:19 -04:00

galaxy.panels.js

UI: Increase minimum sidebar width

2014-01-24 17:49:22 -05:00

galaxy.tools.js

Dataset collections - "reduce" with existing tools.

2014-05-06 08:54:30 -05:00

galaxy.ui.scrollPanel.js

Internet explorer fixes and support -- popup menus and dialogs work better on IE6+,

2008-08-22 17:47:43 -04:00

galaxy.workflow_editor.canvas.js

Workflow Editor: Merge addDataInput and replaceDataInput into common method.

2014-04-22 11:13:27 -05:00

galaxy.workflows.js

Refactor interaction between workflows JS and editor JS for adding nodes.

2014-04-10 13:31:47 -05:00

i18n.js

UI: add GalaxyApp to base_panels.mako; add requirejs i18n plugin and nls/zh, nls/ja locale files, wire into _l client localizer, remove previous localization cruft; remove reliance on history_panel.mako

2014-04-15 12:31:33 -04:00

pack_scripts.py

pack_scripts.py: have yuicompressor use utf-8 as the charset; remove unused packed scripts; update d3.js from 2.9.2 to 3.1.4

2013-04-02 14:20:55 -04:00