Wen-Yu Chung 50e24553ae generate png file instead of pdf file in short read distribution tool. ...

add a fastq converting tool.

2008-05-27 18:51:34 +00:00

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annotation_profiler

Add additional output to annotation profiler.

2008-05-23 20:16:38 +00:00

data_source

Changed URL for communicating with elegans server.

2008-05-16 12:15:04 +00:00

emboss_5

Forgot to eliminate the emboss path...

2008-04-25 19:07:26 +00:00

encode

Misc tool cleanup: eliminated all references to python2.3 / python2.4, imported galaxy eggs in several missed tools. Commented Pattern Matching tool section from tool_conf.xml.sample since tool is not functional. Added job runner info for short read tools in universe_wsgi.ini.sample.

2008-04-25 13:04:55 +00:00

extract

Fix for extract genomic dna tool, check for null path string prior to checking if path exists. No longer throws exception.

2008-05-22 14:04:16 +00:00

fasta_tools

Moving tool description in config files to 'name' attribute so it is shown in histrory. New test for fasta tools and one typo fix.

2008-05-01 14:24:44 +00:00

filters

More changes plus modification requested by Madelaine Gogol

2008-04-28 16:08:30 +00:00

hyphy

Added tool dependencies to xml.

2008-04-25 19:40:16 +00:00

maf

Added tool dependencies to xml.

2008-04-25 19:40:16 +00:00

metag_tools

generate png file instead of pdf file in short read distribution tool.

2008-05-27 18:51:34 +00:00

new_operations

Bug fixes, miscellaneous cleanup for flanking_features, windowSplitter, quality_filter, featureCounter, get_flanks.

2008-05-27 14:28:49 +00:00

plotting

Added tool dependencies to xml.

2008-04-25 19:40:16 +00:00

regVariation

Bug fixes, miscellaneous cleanup for flanking_features, windowSplitter, quality_filter, featureCounter, get_flanks.

2008-05-27 14:28:49 +00:00

stats

Improved information in filtering tool.

2008-05-15 12:38:30 +00:00

taxonomy

Fixes for interface element names

2008-05-07 00:39:41 +00:00

validation

Eliminated all Python2.4 references, added necessary assert statements to ensure minimum version of Python 2.4.

2008-03-28 15:24:50 +00:00

visualization

Typo in GMAJ no warn.

2008-05-27 15:32:53 +00:00