Jeremy Goecks 7538091308 Change order of Bowtie2 output datasets to put aligned reads at top of history.

2013-01-30 12:55:49 -05:00

..

bfast_wrapper.py

Sam header suppression made optional in BFAST and default set to off for BFAST and Bowtie. Fixed dbkey setting on outputs for for BFAST, Bowtie, Mosaik. Fixed sorting of built-in builds for these tools so ordered by pretty name.

2011-05-09 12:11:54 -04:00

bfast_wrapper.xml

Sam header suppression made optional in BFAST and default set to off for BFAST and Bowtie. Fixed dbkey setting on outputs for for BFAST, Bowtie, Mosaik. Fixed sorting of built-in builds for these tools so ordered by pretty name.

2011-05-09 12:11:54 -04:00

bowtie2_wrapper.py

Add option for writing not aligned reads to file

2013-01-18 17:11:04 +01:00

bowtie2_wrapper.xml

Change order of Bowtie2 output datasets to put aligned reads at top of history.

2013-01-30 12:55:49 -05:00

fastq_statistics.xml

fix some typos for tools in folders N-Z

2009-09-25 02:06:03 -04:00

mosaik.xml

Replace old filter() on tool_data_tables by param value hack with param.fields.path for several tools.

2011-11-29 17:30:14 -05:00

PerM.xml

Minor fix for 04e8ed0cd930.

2011-11-29 17:35:14 -05:00

srma_wrapper.py

Update SRMA wrapper to use data tables.

2011-10-31 09:49:51 -04:00

srma_wrapper.xml

Update SRMA wrapper to use data tables.

2011-10-31 09:49:51 -04:00