Nate Coraor e19092e9c5 Add a dataset cleanup script that's optimized for (and compatible only with) PostgreSQL 9.1+. Also add a bunch of tables for logging all cleanup events, which makes reversing such events trivial.

2012-09-10 12:03:23 -04:00

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cleanup_datasets.py

Fix for cleanup_datasets.py when database_connection is the uncommented default in the config file.

2012-04-16 10:07:10 -04:00

delete_datasets_main.sh

Enable the cleanup_datasets script to purge Dataset Instances (HDAs, LDDAs) and mark base datasets as deleted without requiring the container (history, library/folder) to be deleted.

2009-08-10 11:53:28 -04:00

delete_datasets.sh

Enable the cleanup_datasets script to purge Dataset Instances (HDAs, LDDAs) and mark base datasets as deleted without requiring the container (history, library/folder) to be deleted.

2009-08-10 11:53:28 -04:00

delete_userless_histories_main.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

delete_userless_histories.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

pgcleanup.py

Add a dataset cleanup script that's optimized for (and compatible only with) PostgreSQL 9.1+. Also add a bunch of tables for logging all cleanup events, which makes reversing such events trivial.

2012-09-10 12:03:23 -04:00

purge_datasets_main.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_datasets.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_folders_main.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_folders.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_histories_main.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_histories.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_libraries_main.sh

Add ability for admins to delete and undelete library items.

2009-04-23 12:42:05 -04:00

purge_libraries.sh

Backed out changeset 48bbe32beefe which introduced a whole bunch of unintended reversions from a broken hg repository

2011-07-06 09:44:56 +10:00

remove_renamed_datasets_from_disk.py

Moved all dataset related shell and python scripts to new ~/<galaxy root>/scripts/cleanup_datasets directory.

2008-04-03 18:33:09 +00:00

rename_purged_datasets.py

Moved all dataset related shell and python scripts to new ~/<galaxy root>/scripts/cleanup_datasets directory.

2008-04-03 18:33:09 +00:00

update_dataset_size.py

Moved all dataset related shell and python scripts to new ~/<galaxy root>/scripts/cleanup_datasets directory.

2008-04-03 18:33:09 +00:00

update_metadata.py

Fix most of the db flushes to be compatibel with sqlalchemy 05. Add the _monkeypatch_query_method() back into assignmapper due to a single object.get() method in the MetadataCollection class since Metadata has no current hook into mapping.context ( the sqlalchemy session ). There a 4 flushes in metadata,py and 20 flushes in model.__init__.py that still use the _monkeypatch_session_method in assignmapper due to the same issue, but all other flushes are fixed.

2009-11-11 15:59:41 -05:00

update_metadata.sh

Moved all dataset related shell and python scripts to new ~/<galaxy root>/scripts/cleanup_datasets directory.

2008-04-03 18:33:09 +00:00