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Dannon Baker
27 lines
1.0 KiB
Plaintext
27 lines
1.0 KiB
Plaintext
#This is a sample file distributed with Galaxy that enables tools
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#to use genome fasta sequence files. The faseq.loc file has this format
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#(white space characters are TAB characters):
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#
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# <GenomeBuild> <dir>
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#
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# In the dir, each file is fasta format and contains only one sequence. So,
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#for example, if you had hg18 fasta sequences stored in /depot/data2/galaxy/faseq/hg18,
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#then your faseq.loc entry would look like this:
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#
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#hg18 /depot/data2/galaxy/faseq/hg18
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#
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#and your /depot/data2/galaxy/faseq/hg18 directory would contain all of
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#your fasta sequence files (e.g.):
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#
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#-rw-r--r-- 1 wychung galaxy 138082251 2008-04-16 11:57 chr10.fa
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#-rw-r--r-- 1 wychung galaxy 115564 2008-04-16 11:57 chr10_random.fa
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#-rw-r--r-- 1 wychung galaxy 137141451 2008-04-16 11:58 chr11.fa
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#...etc...
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#Your faseq.loc file should include an entry per line for each set of fasta
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#sequence files you have stored. For example:
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#
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#hg18 /depot/data2/galaxy/faseq/hg18
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#mm9 /depot/data2/galaxy/faseq/mm9
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#Arabidopsis /depot/data2/galaxy/faseq/Arabidopsis
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#...etc...
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