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galaxy/scripts
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mvdbeek 4dca001b5d Do verify certs 
You'll be running into problems later on anyway, and it doesn't look
like there are builds with known shasums anymore for more recent
virtualenv zipapps.
2022-02-11 17:25:50 +01:00
..
api
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auth
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cleanup_datasets
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grt
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interactivetools
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loc_files
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metagenomics
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microbes
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objectstore
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slideshow
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taxonomy
Tweaks to taxonomy tools
2010-11-15 15:04:59 -05:00
tool_shed
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tools
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__init__.py
Adding db_shell.py that can be used to simplify writing command line
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apply_tags.py
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bootstrap_history.py
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build_toolbox.py
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celery_shell.py
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check_eggs.py
Add stub fetch_eggs.py/check_eggs.py for people whose build/test/run
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check_model.py
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check_python.py
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common_startup_functions.sh
Only set $GALAXY_DAEMON_LOG when using gravity since other servers have
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common_startup.sh
Do verify certs
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config_sample_to_kwalify.py
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create_db.py
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cwl_conformance_to_test_cases.py
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db_shell.py
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docker_swarm_manager.py
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drmaa_external_killer.py
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drmaa_external_runner.py
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dump_library_paths.py
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edam_mapping.py
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external_chown_script.py
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extract_dataset_part.py
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extract_toolbox_sections.py
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fetch_eggs.py
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fix_dm_versions.py
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functional_tests.py
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galaxy
Make Galaxy installable the Pythonic way via setup.py. Incomplete, but
2016-07-07 13:49:27 -04:00
galaxy_main.py
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galaxy_schemadisp.py
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galaxy-main
Adjust galaxy-main script so we can import from it for easy app setup
2020-12-22 11:18:00 +01:00
get_platforms.py
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get_uwsgi_args.py
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helper.py
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maintenance.sh
Fix issues reported by ShellCheck
2019-06-13 12:53:26 +01:00
manage_db.py
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manage_tool_dependencies.py
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nosetests.py
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pages_identifier_conversion.py
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paster.py
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patch.sh
Add the script I used to create security patches
2016-02-24 16:54:30 -05:00
plugin_staging.py
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release-diff.py
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release.sh
Test Galaxy release script
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resumable_upload.py
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rst2html.py
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runtime_stats.py
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secret_decoder_ring.py
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set_dataset_sizes.py
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set_user_disk_usage.py
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summarize_timings.py
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tests_markdown_compare.tpl
Performance metrics for tests.
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tests_markdown.py
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tests_markdown.tpl
Performance metrics for tests.
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update_cwl_conformance_tests.sh
Add CWL conformance API tests
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update_shed_config_path.py
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validate_tools.sh
Switch to lxml for xml parsing
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