galaxy

mirror of https://github.com/galaxyproject/galaxy.git synced 2026-11-03 21:34:30 +08:00

Files

T

carlfeberhard 888ee700d7 Graph visualization: add parsers, change datatypes

- Removes Data.Text and all subclasses from the applicable datatypes
- Adds all datatypes that can provide node-edge data to be applicable
(xgmll and sif)
- Adds txt and json extensions as applicable
- Minor clean up
- Can use shift key to select multiple nodes

2016-07-15 13:19:19 -04:00

charts

Revise options, add test cases

2016-05-05 13:09:27 -04:00

circster/config

Visualizations registry: switch to entry_point config definition for built-in visualizations

2015-05-07 16:04:25 -04:00

common/templates

Merge branch 'release_15.05' into dev

2015-05-07 13:09:24 -04:00

csg

Add the CSG Viewer visualization plugin

2015-12-07 10:32:32 -05:00

graphviz

Graph visualization: add parsers, change datatypes

2016-07-15 13:19:19 -04:00

phyloviz/config

Visualizations registry: switch to entry_point config definition for built-in visualizations

2015-05-07 16:04:25 -04:00

scatterplot

Merge release_16.01 into dev.

2016-01-26 09:06:52 +00:00

sweepster/config

Visualizations registry: switch to entry_point config definition for built-in visualizations

2015-05-07 16:04:25 -04:00

trackster/config

Visualizations, trackster: allow the user to add the dataset launched from as a new track in an existing trackster visualization; add utils/query-string-parsing.js for pulling query params from the query string

2015-07-29 13:57:34 -04:00

additional_template_paths.xml

Refactor interactive environment plugin framework out of IPython and into Galaxy.

2014-10-18 18:38:04 -04:00

README.txt

Remove outdated sentence.

2015-05-15 12:45:16 +01:00

visualization.dtd

Visualizations registry: switch to entry_point config definition for built-in visualizations

2015-05-07 16:04:25 -04:00

README.txt

Custom visualization plugins
----------------------------

Visualizations can be added to your Galaxy instance by creating
sub-directories, templates, and static files here.

Properly configured and written visualizations will be accessible to
the user when they click the 'visualizations' icon for a dataset
in their history panel.

For more information, see http://wiki.galaxyproject.org/VisualizationsRegistry


Sub-directory structure
-----------------------

In general, sub-directories should follow the pattern:

    my_visualization/
        config/
            my_visualization.xml
        static/
            ... any static files the visualization needs (if any)
        templates/
            ... any Mako templates the visualization needs

The XML config file for a visualization plugin can be validated on the command
line using (from your plugin directory):

    xmllint my_visualization/config/my_visualization.xml --valid --noout