mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-21 05:45:37 +08:00
14 lines
801 B
XML
14 lines
801 B
XML
<tool id="joiner2" name="Relational join 2" version="1.0.0">
|
|
<description>two datasets a specific column of which has the same value</description>
|
|
<command>sort -k $col1 $input1 > $input1.tmp; sort -k $col2 $input2 > $input2.tmp; join -1 $col1 -2 $col2 $input1.tmp $input2.tmp | tr " " "\t" > $out_file1; rm -rf $input1.tmp $input2.tmp </command>
|
|
<inputs>
|
|
<param name="input1" label="Combine dataset" format="tabular" type="data" />
|
|
<param name="col1" label="using column" type="data_column" data_ref="input1" />
|
|
<param name="input2" label="with dataset" format="tabular" type="data"/>
|
|
<param name="col2" label="and column" type="data_column" data_ref="input2" />
|
|
</inputs>
|
|
<outputs>
|
|
<data format="input" name="out_file1" metadata_source="input1" />
|
|
</outputs>
|
|
</tool>
|