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https://github.com/galaxyproject/galaxy.git
synced 2026-08-31 01:02:04 +08:00
mvdbeek
34 lines
878 B
Bash
Executable File
34 lines
878 B
Bash
Executable File
#!/bin/sh
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cd "$(dirname "$0")"/..
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GALAXY_SKIP_CLIENT_BUILD=1 ./scripts/common_startup.sh
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GALAXY_VIRTUAL_ENV="${GALAXY_VIRTUAL_ENV:-.venv}"
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if [ -d "$GALAXY_VIRTUAL_ENV" ]; then
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printf "Activating virtualenv at $GALAXY_VIRTUAL_ENV\n"
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. "$GALAXY_VIRTUAL_ENV/bin/activate"
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fi
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xsd_path="lib/galaxy/tool_util/xsd/galaxy.xsd"
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err_tmp=$(mktemp)
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count=0
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exit=0
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for p in "$@"; do
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count=$((count+1))
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path="$p"
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echo "$path"
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PYTHONPATH=lib:$PYTHONPATH
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export PYTHONPATH
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python -c "import galaxy.tool_util.loader; import lxml.etree; lxml.etree.dump(galaxy.tool_util.loader.load_tool('$path').getroot())" | xmllint --nowarning --noout --schema "$xsd_path" - 2> "$err_tmp"
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if [ $? -eq 0 ]; then
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echo "ok $count";
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else
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echo "not ok $count $path";
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sed 's/^/ /' "$err_tmp"
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exit=1
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fi
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done
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rm "$err_tmp"
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exit $exit
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