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Alexander OSTROVSKY
2641c692e2
accidental files more files migrate ITs from EU accidental files more files migrate ITs from EU accidental files more files migrate ITs from EU accidental files more files
51 lines
1.7 KiB
XML
51 lines
1.7 KiB
XML
<tool id="interactive_tool_paraview" tool_type="interactive" name="Paraview" version="0.1">
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<requirements>
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<!-- kitware/paraviewweb:pvw-v5.6.0-osmesa -->
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<container type="docker">bmcv/galaxy-paraviewweb:latest</container>
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</requirements>
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<entry_points>
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<entry_point name="Paraview based Visualisation of $infile.display_name" requires_domain="True">
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<port>8777</port>
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<!--url>apps/Visualizer</url-->
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</entry_point>
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</entry_points>
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<environment_variables>
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<environment_variable name="SERVER_NAME" strip="True">localhost:8080</environment_variable>
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<environment_variable name="PROTOCOL">wss</environment_variable>
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<environment_variable name="EXTRA_PVPYTHON_ARGS">-dr,--mesa-swr</environment_variable>
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</environment_variables>
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<command><![CDATA[
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service nginx start &&
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export LD_LIBRARY_PATH=\$LD_LIBRARY_PATH:/usr/local/lib/paraview-\$PV_VERSION_MAJOR/:/usr/local/lib/ &&
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mkdir /input/ &&
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#if $infile:
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ln -s '$infile' /input/infile.${infile.ext} &&
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#end if
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Visualizer --paraview /usr/local/lib/paraview-\$PV_VERSION_MAJOR/
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--data /input
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--port 9777
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--server-only
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#if $infile:
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--load-file infile.${infile.ext}
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#end if
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]]>
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</command>
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<inputs>
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<param name="infile" type="data" format="png,jpg,tiff" optional="true" label="Optional input dataset"/>
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</inputs>
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<outputs>
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<data name="outfile" format="txt" />
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</outputs>
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<tests>
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</tests>
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<help>
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ParaView is an open-source, multi-platform application designed to visualize data sets of varying sizes from small to very large.
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</help>
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</tool>
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