Daniel Blankenberg 3f78f9a449 Re-add InterMine tools removed in 401ee23dcf2f70d4be0e975bb3e00a43ae1dfdd0.

2014-06-27 14:44:55 -04:00

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data_source

Re-add InterMine tools removed in 401ee23dcf2f70d4be0e975bb3e00a43ae1dfdd0.

2014-06-27 14:44:55 -04:00

evolution

Migrate tools from the distribution to the tool shed, including but not limited to samtools and fastx_toolkit tools.

2013-09-26 10:05:00 -04:00

extract

Remove broken and/or obsolete tools.

2014-01-27 13:58:31 -05:00

filters

Reorder imports post-PR 403.

2014-06-09 10:53:00 -04:00

genomespace

Fixes for genomespace exporter recieving UnvalidatedValue objects.

2014-05-19 10:17:36 -04:00

maf

Update MAF to BED to use job working directory and built-in primary dataset collection.

2014-04-18 13:23:38 -04:00

meme

Specify meme requirement for fimo tool.

2012-02-02 21:29:30 -06:00

metag_tools

Migrate 22 tools from the distribution to the tool shed.

2014-05-19 13:01:46 -04:00

next_gen_conversion

Fix old wiki links.

2014-04-10 20:00:45 +02:00

ngs_simulation

Update NGS read simulator to use job working directory.

2014-04-18 13:31:13 -04:00

phenotype_association

Migrate 43 tools from the distribution to the tool shed.

2014-01-27 09:53:14 -05:00

plotting

Merged in abrenner/galaxy-central (pull request #215)

2013-10-16 22:12:40 -05:00

solid_tools

Fix tool tip for compute quality statistics

2013-03-19 12:04:24 -04:00

sr_assembly

Add <version_command>.

2013-12-20 10:58:08 +01:00

sr_mapping

Migrate 43 tools from the distribution to the tool shed.

2014-01-27 09:53:14 -05:00

stats

Merged in clayton_turner/galaxy-central (pull request #322)

2014-02-20 10:35:58 -06:00

validation

Eliminated all Python2.4 references, added necessary assert statements to ensure minimum version of Python 2.4.

2008-03-28 15:24:50 +00:00

visualization

Migrate 43 tools from the distribution to the tool shed.

2014-01-27 09:53:14 -05:00