galaxy

lims: workflow selectbox in the samples page fixed

2010-05-06 10:43:13 -04:00

Decouple the masthead from base_panels.mako.

2010-03-31 13:11:05 -04:00

Fix the recentrly introduced grid filter / search bug. Revert the recently introduced grid filter_params hack for generating links since we now use a different approach to rendering links. Convert a few more 'message_type' params to be 'status' instead. Many fixes for the community space app.

2010-05-04 14:21:21 -04:00

genetrack

Added the missing "invalid.html" for GeneTrack.

2009-01-29 11:11:15 -05:00

history

Fix multiple issues for history display. Fixes include: (a) empty annotations hidden; (b) text 'import XXX' added next to import icon; (c) fix dataset display links; (d) fix dataset view links; and (e) fix peek placement.

2010-04-25 16:18:15 -04:00

library

Fix for downloading a library dataset from the library dataset's info page.

2010-05-06 10:08:57 -04:00

mobile

Move toward standardizing the way messages are displayed on Galaxy forms by using params 'message' and 'status' instead of 'msg' and 'messagetype'.

2010-04-02 16:06:43 -04:00

page

Fix the recentrly introduced grid filter / search bug. Revert the recently introduced grid filter_params hack for generating links since we now use a different approach to rendering links. Convert a few more 'message_type' params to be 'status' instead. Many fixes for the community space app.

2010-05-04 14:21:21 -04:00

requests

lims: workflow selectbox in the samples page fixed

2010-05-06 10:43:13 -04:00

root

Enable viewing of datasets via history/view when user is not logged in and/or when user does not have public username.

2010-05-12 09:51:31 -04:00

sample

Move toward standardizing the way messages are displayed on Galaxy forms by using params 'message' and 'status' instead of 'msg' and 'messagetype'.

2010-04-02 16:06:43 -04:00

tracks

trackster: fix track saving

2010-05-07 18:25:29 -04:00

user

trackster:

2010-05-06 12:30:54 -04:00

visualization

Enable users not logged in to view a shared/accessible/published visualization.

2010-05-03 16:32:35 -04:00

webapps

Fixes for uploading a tool to the community space, and keep None from being displayed if there is no user_description.

2010-05-12 09:18:05 -04:00

workflow

Clean up annotation display for workflow steps.

2010-05-09 22:37:50 -04:00

base_panels.mako

Decouple the masthead from base_panels.mako.

2010-03-31 13:11:05 -04:00

base.mako

Add 'metas()' %def to base.mako, to allow subclassing templates to declare additional <meta/> tags.

2010-03-12 12:03:25 -05:00

display_base.mako

Fix multiple issues for history display. Fixes include: (a) empty annotations hidden; (b) text 'import XXX' added next to import icon; (c) fix dataset display links; (d) fix dataset view links; and (e) fix peek placement.

2010-04-25 16:18:15 -04:00

display_common.mako

Fix the recentrly introduced grid filter / search bug. Revert the recently introduced grid filter_params hack for generating links since we now use a different approach to rendering links. Convert a few more 'message_type' params to be 'status' instead. Many fixes for the community space app.

2010-05-04 14:21:21 -04:00

embed_base.mako

Fixes to item embedding in pages. In particular, fixed the editor color changes that were occurring when moving the cursor through embedded items.

2010-03-16 12:00:10 -04:00

form.mako

Very basic support for exporting and importing workflows among instances

2010-05-03 17:35:54 -04:00

grid_base_async.mako

Fix the recentrly introduced grid filter / search bug. Revert the recently introduced grid filter_params hack for generating links since we now use a different approach to rendering links. Convert a few more 'message_type' params to be 'status' instead. Many fixes for the community space app.

2010-05-04 14:21:21 -04:00

grid_base.mako

Fix grid filtering bug.

2010-05-07 08:52:43 -04:00

grid_common.mako

Added sharing options to pages and refactored sharing/display code to create a common code base. Also small additions to grid framework and bug fixes for pages.

2010-01-24 17:38:05 -05:00

message.mako

Fix the recentrly introduced grid filter / search bug. Revert the recently introduced grid filter_params hack for generating links since we now use a different approach to rendering links. Convert a few more 'message_type' params to be 'status' instead. Many fixes for the community space app.

2010-05-04 14:21:21 -04:00

no_access.mako

You can now require that users log in to use Galaxy. The sample config is way different but it's only because I cleaned it up a bit. The only new options are require_login/allow_user_creation.

2008-11-20 15:14:47 -05:00

panels.mako

Decouple the masthead from base_panels.mako.

2010-03-31 13:11:05 -04:00

share_base.mako

Added sharing options to pages and refactored sharing/display code to create a common code base. Also small additions to grid framework and bug fixes for pages.

2010-01-24 17:38:05 -05:00

sharing_base.mako

Rudimentary support for embedding of histories, datasets, and workflows into pages. Specifics: (1) added menus for inserting links to galaxy items and for embedding items to page editor; (2) framework code for producing HTML for embedded items on page display; and (3) toggling to display/hide embedded item content.

2010-02-12 16:45:37 -05:00

tagging_common.mako

Decouple the TagHandler from the model by allowing sub-classes to point to a specified model. Add a baseline functional tests script to provide coverage for tagging histories and history items ( more coverage is needed, of course, and can easily be added to this script ).

2010-04-13 15:35:32 -04:00

tool_executed.mako

Fix for issue #210 , redirect to the proper path when the tool executed form is instructed to redirect.

2009-11-11 14:41:32 -05:00

tool_form.mako

Generalize the dbkey text + autocomplete feature to work with any select box and replace all select boxes with >20 options--mostly the dbkey and dataset format selects--with text + autocomplete inputs. Also add icon to text + autocomplete inputs so that it's clearer that they're text + autocomplete, not just text.

2010-04-02 17:29:15 -04:00