mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-01 15:37:32 +08:00
Nate Coraor
09feaf6f4d
dictConfig. Default log message format varies by stack. - Refactor a lot of file extension handling in to galaxy.util.path. - Simplify and improve config file finding. - Simplify and improve native app creation. - Integrate uWSGI argument generation with @jmchilton's improvements to the startup scripts. - Fix starting without a config file under uWSGI
53 lines
1.4 KiB
Bash
Executable File
53 lines
1.4 KiB
Bash
Executable File
#!/bin/sh
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# Usage: ./run_reports.sh [--sync-config] <start|stop>
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#
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#
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# Description: This script can be used to start or stop the galaxy
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# reports web application. Passing in --sync-config as the first
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# argument to this will cause Galaxy's database and path parameters
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# from galaxy.ini to be copied over into reports.ini.
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cd "$(dirname "$0")"
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GALAXY_REPORTS_PID=${GALAXY_REPORTS_PID:-reports_webapp.pid}
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GALAXY_REPORTS_LOG=${GALAXY_REPORTS_LOG:-reports_webapp.log}
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PID_FILE=$GALAXY_REPORTS_PID
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LOG_FILE=$GALAXY_REPORTS_LOG
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. ./scripts/common_startup_functions.sh
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if [ "$1" = "--sync-config" ];
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then
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python ./scripts/sync_reports_config.py
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shift
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fi
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parse_common_args $@
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run_common_start_up
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setup_python
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if [ -z "$GALAXY_REPORTS_CONFIG" ]; then
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if [ -f reports_wsgi.ini ]; then
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GALAXY_REPORTS_CONFIG=reports_wsgi.ini
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elif [ -f config/reports_wsgi.ini ]; then
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GALAXY_REPORTS_CONFIG=config/reports_wsgi.ini
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elif [ -f config/reports.ini ]; then
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GALAXY_REPORTS_CONFIG=config/reports.ini
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elif [ -f config/reports.yml ]; then
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GALAXY_REPORTS_CONFIG=config/reports.yml
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fi
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export GALAXY_REPORTS_CONFIG
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fi
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if [ -n "$GALAXY_REPORTS_CONFIG_DIR" ]; then
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python ./scripts/build_universe_config.py "$GALAXY_REPORTS_CONFIG_DIR" "$GALAXY_REPORTS_CONFIG"
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fi
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find_server ${GALAXY_REPORTS_CONFIG:-none} reports
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echo "executing: $run_server $server_args"
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eval $run_server $server_args
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