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26 lines
866 B
XML
26 lines
866 B
XML
<tool id="qc_stdout" name="qc_stdout" version="1.0.0">
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<stdio>
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<regex match="Quality of sample is .*%\." source="stdout" level="qc" />
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</stdio>
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<command detect_errors="exit_code"><![CDATA[
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cp '$input' '$output' &&
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echo "Some example stdout........" &&
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echo "Quality of sample is ${int($quality) * 10}%." &&
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echo "Some more example stdout........" &&
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>&2 echo "my standard error"
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]]></command>
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<inputs>
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<param name="input" type="data" format="txt" label="Input data" />
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<param name="quality" type="integer" value="9" />
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</inputs>
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<outputs>
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<data name="output" format="txt" />
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</outputs>
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<tests>
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<test>
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<param name="input" value="simple_line.txt" />
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<output name="output" checksum="sha1$8156d7ca0f46ed7abac98f82e36cfaddb2aca041" />
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</test>
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</tests>
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</tool>
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