mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
31 lines
1.0 KiB
XML
31 lines
1.0 KiB
XML
<tool id="collection_split_on_column" name="collection_split_on_column" version="0.1.0">
|
|
<command>
|
|
mkdir outputs; cd outputs; awk '{ print \$2 > (\$1 ".tabular") }' $input1
|
|
</command>
|
|
<inputs>
|
|
<param name="input1" type="data" label="Input Table" help="Table to split on first column" format="tabular" />
|
|
</inputs>
|
|
<outputs>
|
|
<collection name="split_output" type="list" label="Table split on first column">
|
|
<discover_datasets pattern="__name_and_ext__" directory="outputs" />
|
|
</collection>
|
|
</outputs>
|
|
<tests>
|
|
<test>
|
|
<param name="input1" value="tinywga.fam" />
|
|
<output_collection name="split_output" type="list">
|
|
<element name="101">
|
|
<assert_contents>
|
|
<has_text_matching expression="^1\n2\n3\n$" />
|
|
</assert_contents>
|
|
</element>
|
|
<element name="1334">
|
|
<assert_contents>
|
|
<has_text_matching expression="^1\n10\n11\n12\n13\n2\n$" />
|
|
</assert_contents>
|
|
</element>
|
|
</output_collection>
|
|
</test>
|
|
</tests>
|
|
</tool>
|