mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
John Chilton
22bddab240
Previously LWR jut serialized tool requirements, by transitioning to this class LWR should be able to resolve tool shed installed packages as well - requiring the additional repository and tool dependency context.
45 lines
1.6 KiB
Python
45 lines
1.6 KiB
Python
from galaxy.model import tool_shed_install
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from galaxy.tools.deps import requirements
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from galaxy.tools.deps import dependencies
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def test_serialization():
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repository = tool_shed_install.ToolShedRepository(
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owner="devteam",
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name="tophat",
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installed_changeset_revision="abcdefghijk",
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)
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dependency = tool_shed_install.ToolDependency(
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name="tophat",
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version="2.0",
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type="package",
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status=tool_shed_install.ToolDependency.installation_status.INSTALLED,
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)
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dependency.tool_shed_repository = repository
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tool_requirement = requirements.ToolRequirement(
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name="tophat",
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version="2.0",
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type="package",
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)
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descript = dependencies.DependenciesDescription(
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requirements=[tool_requirement],
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installed_tool_dependencies=[dependency],
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)
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result_descript = dependencies.DependenciesDescription.from_dict(
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descript.to_dict()
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)
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result_requirement = result_descript.requirements[0]
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assert result_requirement.name == "tophat"
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assert result_requirement.version == "2.0"
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assert result_requirement.type == "package"
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result_tool_shed_dependency = result_descript.installed_tool_dependencies[0]
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result_tool_shed_dependency.name = "tophat"
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result_tool_shed_dependency.version = "2.0"
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result_tool_shed_dependency.type = "package"
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result_tool_shed_repository = result_tool_shed_dependency.tool_shed_repository
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result_tool_shed_repository.name = "tophat"
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result_tool_shed_repository.owner = "devteam"
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result_tool_shed_repository.installed_changeset_revision = "abcdefghijk"
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