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https://github.com/galaxyproject/galaxy.git
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John Chilton
e99adb5b0f
Runs tests in a Dockerfile with pre-migrated databases and all testing dependencies (postgres, mysql, npm, casper, phantomjs, etc...). Hopefully this makes it easier to run more interesting tests - down the road I would like to add more options for things like condor, slurm, run as real user, etc....
24 lines
779 B
Bash
24 lines
779 B
Bash
#!/bin/bash
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set -e
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# TODO: switch on environment to boot mysql here...
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if [ "$GALAXY_TEST_DATABASE_TYPE" = "postgres" ];
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then
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su -c '/usr/lib/postgresql/9.3/bin/pg_ctl -o "-F" start -D /opt/galaxy/db' postgres
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sleep 3
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export GALAXY_TEST_DBURI="postgres://galaxy@localhost:5930/galaxy"
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elif [ "$GALAXY_TEST_DATABASE_TYPE" = "mysql" ];
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then
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sh /opt/galaxy/start_mysql.sh
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export GALAXY_TEST_DBURI="mysql://galaxy:galaxy@localhost/galaxy?unix_socket=/var/run/mysqld/mysqld.sock"
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elif [ "$GALAXY_TEST_DATABASE_TYPE" = "sqlite" ];
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then
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export GALAXY_TEST_DBURI="sqlite:////opt/galaxy/galaxy.sqlite"
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else
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echo "Unknown database type"
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exit 1
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fi
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cd /galaxy
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GALAXY_CONFIG_OVERRIDE_DATABASE_CONNECTION="$GALAXY_TEST_DBURI" sh manage_db.sh upgrade
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sh run_tests.sh $@
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