Nicola Soranzo 65519718b3 Fix "KeyError: name" error when running "./run_tests.sh -api". ...

Example traceback for test/api/test_workflows.py:WorkflowsApiTestCase.test_workflow_run_dynamic_output_collections :

galaxy.web.framework.decorators: ERROR: Uncaught exception in exposed API method:
Traceback (most recent call last):
  File "/opt/galaxy/lib/galaxy/web/framework/decorators.py", line 260, in decorator
    rval = func( self, trans, *args, **kwargs)
  File "/opt/galaxy/lib/galaxy/webapps/galaxy/api/workflows.py", line 182, in create
    return self.__api_import_new_workflow( trans, payload, **kwd )
  File "/opt/galaxy/lib/galaxy/webapps/galaxy/api/workflows.py", line 374, in __api_import_new_workflow
    workflow, missing_tool_tups = self._workflow_from_dict( trans, data, **from_dict_kwds )
  File "/opt/galaxy/lib/galaxy/web/base/controller.py", line 1111, in _workflow_from_dict
    publish=publish
  File "/opt/galaxy/lib/galaxy/managers/workflows.py", line 165, in build_workflow_from_dict
    missing_tool_tup = ( step_dict[ 'tool_id' ], step_dict[ 'name' ], step_dict[ 'tool_version' ] )
KeyError: 'name'

2015-09-11 19:05:37 +01:00

..

__init__.py

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

helpers.py

Workflow scaling test infrastructure.

2015-03-25 14:54:48 -04:00

test_authenticate.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_dataset_collections.py

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

test_datasets.py

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

test_datatypes.py

Expose datatype converter information via datatype API.

2014-12-25 12:24:23 -05:00

test_framework.py

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

test_histories.py

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

test_history_contents_provenance.py

Fix provenance controller for non-admins.

2014-05-21 14:33:24 -05:00

test_history_contents.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_jobs.py

Attempt to fix intermittently failing jobs API test.

2015-03-02 22:39:50 -05:00

test_libraries.py

Fix library API test for format field redefinition in 9d152ed.

2014-09-16 14:48:39 -04:00

test_page_revisions.py

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

test_pages.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_search.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_tool_data.py

Tool data API testing fixes.

2015-03-02 22:36:24 -05:00

test_tools.py

Merge remote-tracking branch 'galaxyproject-careful/release_15.05' into dev

2015-05-15 13:41:29 -04:00

test_users.py

API tests for authenticate and some of users endpoints.

2014-08-04 21:45:02 -04:00

test_workflow_1.ga

Test for importing workflows with annotations.

2014-12-13 12:58:34 -05:00

test_workflow_2.ga

Allow specifing workflow parameter replacements by step UUID.

2014-12-15 22:20:12 -05:00

test_workflow_extraction.py

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

test_workflow_map_reduce_pause.ga

Add file missed with pull request 505.

2014-12-01 21:18:56 -05:00

test_workflow_matching_lists.ga

Add workflow test demonstrating failure when multiple lists with different identifiers are using in workflows.

2014-08-27 16:32:26 -04:00

test_workflow_pause.ga

Implement pause module for workflows.

2014-11-13 13:47:39 -05:00

test_workflow_topoambigouity_auto_laidout.ga

Test cases and test workflows to verify workflow import stability.

2014-08-04 09:33:40 -04:00

test_workflow_topoambigouity.ga

Test cases and test workflows to verify workflow import stability.

2014-08-04 09:33:40 -04:00

test_workflow_validation_1.ga

Synchronize validation of workflows between web and API controllers.

2014-09-10 11:51:10 -04:00

test_workflow_with_runtime_input.ga

More complete testing of workflow import and export.

2014-09-18 09:50:52 -04:00

test_workflows_from_yaml.py

Remove test_workflow_from_yaml due to inconsistent yaml loading (makes it a bad test). Details in comment.

2015-05-04 12:48:50 -04:00

test_workflows.py

Fix MissingToolException when running "./run_tests.sh -api" without "-with_framework_test_tools".

2015-09-11 19:05:37 +01:00

yaml_to_workflow.py

Fix "KeyError: name" error when running "./run_tests.sh -api".

2015-09-11 19:05:37 +01:00