John Chilton 77b167bbd1 Comment out broken liftOver tests. ...

liftOver loc file handling is problematic (https://trello.com/c/A6I6zQvF). If it weren't this wouldn't be a problem. I could fix the API functional test framework to mimic the older form driven approach but it would take a week and would be rendered moot by fixing liftOver. Unfortunately, fixing liftOver would likely break a lot of existing workflows and tool reruns so I am not fixing that either.

Only option left, admittedly a crappy one, is to comment out the tests.

2015-02-23 23:09:19 -05:00

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extract_genomic_dna.py

bugfix and one test fix

2013-10-24 18:13:18 +02:00

extract_genomic_dna.xml

Quote commandline arguments for extract genomic DNA tool.

2014-09-02 13:15:17 -04:00

liftOver_wrapper.py

Added additional options to the liftOver tool. It now supports GFF and GTF formats and allows multiple output regions and related options.

2011-07-26 16:14:31 -04:00

liftOver_wrapper.xml

Comment out broken liftOver tests.

2015-02-23 23:09:19 -05:00