John Chilton b56bd85b6a Expose $__tool_directory__ to tools. ...

Repeatedly one wants to do things like create symbolic links and then call a helper script - the 'interpreter' tag doesn't allow shell commands before calling a helper script so they could not be used in this fashion. The previous pattern for doing this was then to use the ToolShed only 'set_environment' requirement tag. These were onerous to setup and the resulting tools were no longer portable to non-ToolShed installed contexts - I believe this variant is more robust and elegant.

More information https://trello.com/c/0pgF5PBQ and here https://trello.com/c/XK5SqE1i.

2015-02-03 10:29:34 -05:00

..

tool-data

Allow specification of multiple data manager configuration files...

2014-12-15 00:20:35 -05:00

tools

Expose $__tool_directory__ to tools.

2015-02-03 10:29:34 -05:00

__init__.py

New functional test harness. Update to recent nose. No longer rely on nose to manage the embedded web server (this is not done in functional_tests.py). Log page contents to a temporary file on check_page_for_string error.

2009-10-20 13:08:29 -04:00

database_contexts.py

Models: Introduce app.install_model.

2013-12-05 00:20:54 -06:00

test_admin_features.py

Fix admin and library feature functional tests. Improve handling of checkbox parameters and multi-select inputs in functional tests.

2014-04-29 15:39:43 -04:00

test_data_managers.py

Adjust test/functional/test_data_managers.py for run_tool ret val change in 21e3d69.

2014-12-08 00:21:47 -05:00

test_data_security.py

More work on eliminating references to test_db_util.sa_session.

2014-01-11 22:40:18 -06:00

test_dataset_features.py

More work on eliminating references to test_db_util.sa_session.

2014-01-11 22:40:18 -06:00

test_get_data.py

More work on eliminating references to test_db_util.sa_session.

2014-01-11 22:40:18 -06:00

test_history_functions.py

Fix test_history_functions test 80, copying history items.

2014-07-09 16:11:50 -04:00

test_library_features.py

HTML escape user-settable values in Data Libraries. Update tests to reflect that e.g. quotes are now html escaped within pages. Eliminate the unnecessary use of Params() object for these controllers.

2014-12-08 12:27:48 -05:00

test_library_security.py

More work on eliminating references to test_db_util.sa_session.

2014-01-11 22:40:18 -06:00

test_library_templates.py

Fix functional tests for library templates.

2014-04-25 10:41:53 -04:00

test_metadata_editing.py

Twill test framework cleanup. Fix functional tests for history functions.

2014-04-23 16:46:14 -04:00

test_sample_tracking.py

Fix sample tracking functional tests.

2014-04-29 13:21:28 -04:00

test_tags.py

More work on eliminating references to test_db_util.sa_session.

2014-01-11 22:40:18 -06:00

test_toolbox.py

Allow tools to output collections with static or determinable structure.

2015-01-15 09:30:00 -05:00

test_ucsc_table_browser.py

Final to_json_string/from_json_string elimination in tests.

2014-09-09 10:12:40 -04:00

test_user_info.py

Fix library template functional tests. Revert change to user info tests that was breaking library template tests.

2014-04-22 12:58:42 -04:00

workflow.py

Allow tools to test runtime discovered datasets.

2014-03-29 17:11:17 -05:00