mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-21 13:50:20 +08:00
79 lines
3.7 KiB
HTML
79 lines
3.7 KiB
HTML
<?xml version="1.0" encoding="utf-8" ?>
|
|
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
|
|
<head>
|
|
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
|
|
<meta name="generator" content="Docutils 0.3.9: http://docutils.sourceforge.net/" />
|
|
<title>ABOUT GALAXY</title>
|
|
<link rel="stylesheet" href="/static/style/base.css" type="text/css" />
|
|
<link rel="stylesheet" href="/static/style/help.css" type="text/css" />
|
|
</head>
|
|
<body>
|
|
<div class="document" id="about-galaxy">
|
|
<h1 class="title">ABOUT GALAXY</h1>
|
|
<div class="section" id="people">
|
|
<h2><a name="people">People:</a></h2>
|
|
<ul class="simple">
|
|
<li>Istvan Albert - <em>Co-PI</em></li>
|
|
<li>Daniel Blankenberg - <em>Graduate student</em></li>
|
|
<li>Richard Burhans - <em>Sysadmin</em></li>
|
|
<li>Laura Elnitski - <em>Co-PI</em></li>
|
|
<li>Belinda Giardine - <em>Programmer</em></li>
|
|
<li>Ross Hardison - <em>Co-PI</em></li>
|
|
<li>Jim Kent - <em>Co-PI</em></li>
|
|
<li>David King - <em>Graduate student</em></li>
|
|
<li>Webb Miller - <em>Co-PI</em></li>
|
|
<li>Anton Nekrutenko - <em>PI</em></li>
|
|
<li>Cathy Riemer - <em>Programmer</em></li>
|
|
<li>Prachi Shah - <em>Programmer</em></li>
|
|
<li>Ian Schenck - <em>Undergraduate student</em></li>
|
|
<li>James Taylor - <em>Graduate student</em></li>
|
|
<li>Yi Zhang - <em>Programmer</em></li>
|
|
</ul>
|
|
</div>
|
|
<hr class="docutils" />
|
|
<div class="section" id="development">
|
|
<h2><a name="development">Development:</a></h2>
|
|
<p><strong>Galaxy core</strong> - <em>Istvan Albert</em> and <em>James Taylor</em></p>
|
|
<p><strong>Interface</strong> - <em>James Taylor</em>, <em>Istvan Albert</em>, <em>Anton Nekrutenko</em></p>
|
|
<p><strong>Tools</strong> -</p>
|
|
<ul class="simple">
|
|
<li>Data sources - <em>Istvan Albert</em></li>
|
|
<li>EMBOSS, Phylip, mafs - <em>Daniel Blankenberg</em></li>
|
|
<li>Text Tools, Sequence Extractors - <em>Richard Burhans</em>, <em>Anton Nekrutenko</em>, <em>Ian Schenck</em></li>
|
|
<li>Operations - <em>James Taylor</em>, <em>Yi Zhang</em></li>
|
|
<li>Statistics, Graphs - <em>Istvan Albert</em>, <em>David King</em></li>
|
|
</ul>
|
|
<p><strong>Project management</strong> - <em>Anton Nekrutenko</em></p>
|
|
<p>Current version of Galaxy uses many ideas developed by <em>Laura Elnitski</em>, <em>Belinda Giardine</em>, and <em>Cathy Riemer</em> in Galaxy1 and GALA.</p>
|
|
</div>
|
|
<hr class="docutils" />
|
|
<div class="section" id="special-thanks-to">
|
|
<h2><a name="special-thanks-to">Special thanks to:</a></h2>
|
|
<ul class="simple">
|
|
<li>David Haussler</li>
|
|
<li>Ewan Birney</li>
|
|
<li>Hiram Clawson</li>
|
|
<li>Angie Hinrichs</li>
|
|
<li>Darin London</li>
|
|
<li>Members of Hardison, Makova, Miller, and Nekrutenko Labs</li>
|
|
</ul>
|
|
</div>
|
|
<hr class="docutils" />
|
|
<div class="section" id="technology">
|
|
<h2><a name="technology">Technology:</a></h2>
|
|
<p>Galaxy core is written entirely in Python. It uses the following open source technologies:</p>
|
|
<ul class="simple">
|
|
<li>web-server <a class="reference" href="http://www.cherrypy.org/">CherryPy</a></li>
|
|
<li>database <a class="reference" href="http://www.sleepycat.com/products/db.shtml">BerkelyDB</a></li>
|
|
<li>XML library <a class="reference" href="http://effbot.org/zone/element-index.htm">ElementTree</a></li>
|
|
<li>HTML templating library <a class="reference" href="http://www.cheetahtemplate.org/">Cheetah</a></li>
|
|
</ul>
|
|
<p>Galaxy API generated from source code can be found <a class="reference" href="http://www.bx.psu.edu/trac/local/docs/index.html">here</a></p>
|
|
<hr class="docutils" />
|
|
<p><a class="reference" href="http://www.bx.psu.edu">The Center for Comparative Genomics and Bioinformatics</a> at <a class="reference" href="http://www.psu.edu">Penn State</a> | 2005</p>
|
|
</div>
|
|
</div>
|
|
</body>
|
|
</html>
|