opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-09-21 13:50:20 +08:00
Code Issues Packages Projects Releases Wiki Activity
Files
29a748959077aa57d0942184b45477208158e24f
galaxy/scripts
T
History
Dannon Baker 29a7489590 Merge remote-tracking branch 'upstream/release_22.01' into dev
2022-02-16 14:02:31 -05:00
..
api
Apply black formatting.
2022-02-03 07:42:20 -05:00
auth
Apply black formatting.
2022-02-03 07:42:20 -05:00
cleanup_datasets
Apply black formatting.
2022-02-03 07:42:20 -05:00
grt
Apply black formatting.
2022-02-03 07:42:20 -05:00
interactivetools
Apply black formatting.
2022-02-03 07:42:20 -05:00
loc_files
Apply black formatting.
2022-02-03 07:42:20 -05:00
metagenomics
Apply black formatting.
2022-02-03 07:42:20 -05:00
microbes
Apply black formatting.
2022-02-03 07:42:20 -05:00
objectstore
Apply black formatting.
2022-02-03 07:42:20 -05:00
slideshow
Apply black formatting.
2022-02-03 07:42:20 -05:00
taxonomy
Tweaks to taxonomy tools
2010-11-15 15:04:59 -05:00
tool_shed
Apply black formatting.
2022-02-03 07:42:20 -05:00
tools
Apply black formatting.
2022-02-03 07:42:20 -05:00
__init__.py
Adding db_shell.py that can be used to simplify writing command line
2012-03-05 12:11:53 -06:00
apply_tags.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
bootstrap_history.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
build_toolbox.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
celery_shell.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
check_eggs.py
Add stub fetch_eggs.py/check_eggs.py for people whose build/test/run
2015-11-06 11:06:11 -05:00
check_model.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
check_python.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
common_startup_functions.sh
Only set $GALAXY_DAEMON_LOG when using gravity since other servers have
2022-01-26 14:50:39 -05:00
common_startup.sh
Merge remote-tracking branch 'upstream/release_22.01' into dev
2022-02-16 14:02:31 -05:00
config_sample_to_kwalify.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
create_db.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
cwl_conformance_to_test_cases.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
db_shell.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
docker_swarm_manager.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
drmaa_external_killer.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
drmaa_external_runner.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
dump_library_paths.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
edam_mapping.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
external_chown_script.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
extract_dataset_part.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
extract_toolbox_sections.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
fetch_eggs.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
fix_dm_versions.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
functional_tests.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
galaxy
Make Galaxy installable the Pythonic way via setup.py. Incomplete, but
2016-07-07 13:49:27 -04:00
galaxy_main.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
galaxy_schemadisp.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
galaxy-main
Adjust galaxy-main script so we can import from it for easy app setup
2020-12-22 11:18:00 +01:00
get_platforms.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
get_uwsgi_args.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
helper.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
maintenance.sh
Fix issues reported by ShellCheck
2019-06-13 12:53:26 +01:00
manage_db.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
manage_tool_dependencies.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
nosetests.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
pages_identifier_conversion.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
paster.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
patch.sh
Add the script I used to create security patches
2016-02-24 16:54:30 -05:00
plugin_staging.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
release-diff.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
release.sh
Test Galaxy release script
2021-12-08 10:43:09 +00:00
resumable_upload.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
rst2html.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
runtime_stats.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
secret_decoder_ring.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
set_dataset_sizes.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
set_user_disk_usage.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
summarize_timings.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
tests_markdown_compare.tpl
Performance metrics for tests.
2021-02-12 20:44:05 -05:00
tests_markdown.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
tests_markdown.tpl
Performance metrics for tests.
2021-02-12 20:44:05 -05:00
update_cwl_conformance_tests.sh
Add CWL conformance API tests
2021-11-23 14:10:21 +00:00
update_shed_config_path.py
Apply black formatting.
2022-02-03 07:42:20 -05:00
validate_tools.sh
Switch to lxml for xml parsing
2020-05-12 15:00:27 +02:00