mirror of
https://github.com/galaxyproject/galaxy.git
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76 lines
2.4 KiB
YAML
76 lines
2.4 KiB
YAML
name: Tool framework tests
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on:
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push:
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paths-ignore:
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- 'client/**'
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- 'doc/**'
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- 'lib/galaxy_test/selenium/**'
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- 'packages/**'
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pull_request:
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paths-ignore:
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- 'client/**'
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- 'doc/**'
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- 'lib/galaxy_test/selenium/**'
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- 'packages/**'
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schedule:
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# Run at midnight UTC every Tuesday
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- cron: '0 0 * * 2'
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env:
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GALAXY_TEST_DBURI: 'postgresql+psycopg://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8'
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GALAXY_TEST_RAISE_EXCEPTION_ON_HISTORYLESS_HDA: '1'
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concurrency:
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group: ${{ github.workflow }}-${{ github.ref }}
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cancel-in-progress: true
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jobs:
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test:
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name: Test
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runs-on: ubuntu-latest
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strategy:
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matrix:
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python-version: ['3.10']
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use-legacy-api: ['if_needed', 'always']
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services:
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postgres:
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image: postgres:18
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env:
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POSTGRES_USER: postgres
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POSTGRES_PASSWORD: postgres
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POSTGRES_DB: postgres
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ports:
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- 5432:5432
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steps:
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- if: github.event_name == 'schedule'
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run: |
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echo "GALAXY_CONFIG_OVERRIDE_METADATA_STRATEGY=extended" >> $GITHUB_ENV
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echo "GALAXY_CONFIG_OVERRIDE_OUTPUTS_TO_WORKING_DIRECTORY=true" >> $GITHUB_ENV
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- uses: actions/checkout@v6
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with:
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path: 'galaxy root'
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persist-credentials: false
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- uses: actions/setup-python@v6
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install uv
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uses: astral-sh/setup-uv@v7
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- name: Get full Python version
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id: full-python-version
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shell: bash
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run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT
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- name: Cache galaxy venv
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uses: actions/cache@v5
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with:
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path: 'galaxy root/.venv'
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key: gxy-venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }}-framework
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- name: Run tests
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run: GALAXY_TEST_USE_LEGACY_TOOL_API="${{ matrix.use-legacy-api }}" ./run_tests.sh --coverage --framework-tools
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working-directory: 'galaxy root'
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- uses: codecov/codecov-action@v5
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with:
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flags: framework
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working-directory: 'galaxy root'
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- uses: actions/upload-artifact@v7
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if: failure()
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with:
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name: Tool framework test results (${{ matrix.python-version }})
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path: 'galaxy root/run_framework_tests.html'
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