John Chilton b097a37d25 Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

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analyze_covariates.xml

Refactor GATK wrappers to use token macros to eliminate duplication in citation section.

2013-03-22 00:41:08 -05:00

count_covariates.xml

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

depth_of_coverage.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

gatk_macros.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

gatk_wrapper.py

Remove bam index metadata validator from GATK tools. The GATK wrapper will now build missing bam indexes on the fly as needed.

2012-02-27 12:49:30 -05:00

indel_realigner.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

print_reads.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

realigner_target_creator.xml

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

table_recalibration.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

unified_genotyper.xml

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

variant_annotator.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

variant_apply_recalibration.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

variant_combine.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

variant_eval.xml

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

variant_filtration.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00

variant_recalibrator.xml

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

variant_select.xml

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

variants_validate.xml

Covert more duplicated GATK wrapper code to macros.

2013-03-22 00:41:08 -05:00