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Nicola Soranzo
f865e8359f
Also: - dos2unix test/functional/tools/for_workflows/head.xml - Single-quote text and data params in `<command/>` - Remove deprecated `interpreter` attribute of `<command />`
43 lines
1.2 KiB
XML
43 lines
1.2 KiB
XML
<tool id="Show beginning1" name="Select first" version="1.0.0">
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<description>lines from a dataset</description>
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<command>
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perl '$__tool_directory__/headWrapper.pl' '$input' $lineNum '$out_file1'
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</command>
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<inputs>
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<param name="lineNum" type="integer" value="10" label="Select first" help="lines"/>
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<param name="input" type="data" format="txt" label="from"/>
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</inputs>
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<outputs>
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<data name="out_file1" format="input" metadata_source="input"/>
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</outputs>
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<tests>
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<test>
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<param name="lineNum" value="10"/>
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<param name="input" value="1.bed"/>
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<output name="out_file1" file="eq-showbeginning.dat"/>
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</test>
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</tests>
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<help>
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**What it does**
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This tool outputs specified number of lines from the **beginning** of a dataset
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-----
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**Example**
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Selecting 2 lines from this::
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chr7 56632 56652 D17003_CTCF_R6 310 +
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chr7 56736 56756 D17003_CTCF_R7 354 +
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chr7 56761 56781 D17003_CTCF_R4 220 +
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chr7 56772 56792 D17003_CTCF_R7 372 +
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chr7 56775 56795 D17003_CTCF_R4 207 +
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will produce::
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chr7 56632 56652 D17003_CTCF_R6 310 +
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chr7 56736 56756 D17003_CTCF_R7 354 +
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</help>
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</tool>
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